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[Do not review] Upgrade Python to 3.12 and use Ubuntu 24.04 #1280

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Updates to Python 3.12, Jax 0.6.2, and changes the base image to Ubuntu 24.04 to avoid building Python manually. This includes custom-built SeqIO and TensorFlow to account for CUDA requirements and other incompatibility issues.

See: SeqIO and TensorFlow for details

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