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• Merge pull request #130 from AlsammanAlsamman/feature/vectorize-allel…

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• Speed up allele comparisons and per-chromosome splitting

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• Opt-in exclusion of pileup regions and strand-ambiguous SNPs

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• Graph Update: pip in /. #1599298866

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• Merge pull request #128 from apriha/feature/fix-ruff-lint

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• Fix CI issues

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• Loosen resource checks for tests with downloads

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• Fix CI issues

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• Fix Ruff linting issues

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