Skip to content
Open
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
2 changes: 1 addition & 1 deletion flowcraft/generator/templates/reads_download.nf
Original file line number Diff line number Diff line change
Expand Up @@ -21,7 +21,7 @@ process reads_download_{{ pid }} {
each file(aspera_key) from IN_asperaKey_{{ pid }}

output:
set val({ "$name" != "null" ? "$name" : "$accession_id" }), file("${accession_id}/*fq.gz") optional true into {{ output_channel }}
set val({ "$name" != "null" ? "$name" : "$accession_id" }), file("${accession_id}/*fq.gz") into {{ output_channel }}
{% with task_name="reads_download", sample_id="accession_id" %}
{%- include "compiler_channels.txt" ignore missing -%}
{% endwith %}
Expand Down