This repository was archived by the owner on May 31, 2024. It is now read-only.
feat: Added option to pass custom WES Adapter environment variables #418
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Description of Changes
[//]: # This adds option to pass custom environment variables into WES Adapter
[//]: # This adds option to pass custom environment variables into Workflow Job
Description of how you validated changes
[//]: # agc account activate --customWesEnvVars "CUSTOM_WORKFLOW_JOB_ENVIRONMENTS=[{ \"name\": \"MINIWDL__AWS__DESCRIBE_PERIOD\", \"value\": 10 }, { \"name\": \"MINIWDL__AWS__SUBMIT_PERIOD\", \"value\": 10 }]"
[//]: # After agc account activate the SSM parameter /agc/_common/customWesEnvVars must be set
[//]: # agc configure email [email protected]
[//]: # After agc context deploy --context miniContext a WES Adapter Lambda must have CUSTOM_WORKFLOW_JOB_ENVIRONMENTS env var
[//]: # After agc workflow run hello --context miniContext go to Batch Workflow Job Logs and find MINIWDL__AWS__DESCRIBE_PERIOD and MINIWDL__AWS__SUBMIT_PERIOD under === ENVIRONMENT === section
Checklist
By submitting this pull request, I confirm that my contribution is made under the terms of the Apache-2.0 license