Bacterial population genetics

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1. PopPUNK PopPUNK Public

   PopPUNK 👨‍🎤 (POPulation Partitioning Using Nucleotide Kmers)

   Python 111 23

2. PopPIPE PopPIPE Public

   Population analysis PIPEline 🛠🧬

   Python 28 7

3. sketchlib.rust sketchlib.rust Public

   Fast sequence distance estimates

   Rust 34 6

4. ggCaller ggCaller Public

   Bifrost graph gene caller.

   C++ 101 6

5. ska.rust ska.rust Public

   Split k-mer analysis – version 2

   Rust 106 9

6. sparrowhawk sparrowhawk Public

   In-browser tools for bacterial genome analysis 🦅

   Vue 12 1