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make freesurfer 7 the default

Status: Open.

#97 In bids-apps/freesurfer;

· Remi-Gau opened on Jul 24, 2026

Add --bids-filter-file

Status: Open.

#94 In bids-apps/freesurfer;

· JohannesWiesner opened on Mar 30, 2026

Also allow --participant-label

Status: Open.

#89 In bids-apps/freesurfer;

· JohannesWiesner opened on Jun 26, 2025

Adding the -notal-check flag

Status: Open.

#84 In bids-apps/freesurfer;

· augustoielo opened on Feb 20, 2024

Add a flag to ignore specific runs for some subjects

Status: Open.

#82 In bids-apps/freesurfer;

· SamGuay opened on Oct 31, 2023

[BUG] - docker tags are wrong in the README.md and run.py

bug

Status: Open.

#80 In bids-apps/freesurfer;

· SamGuay opened on Sep 19, 2023

Possible to skip participants without aparc.stats files?

Status: Open.

#68 In bids-apps/freesurfer;

· stong3 opened on Apr 19, 2021

Question about .annot file

Status: Open.

#66 In bids-apps/freesurfer;

· tanjia123456 opened on Oct 15, 2020

Minimal freesurfer image

enhancement

help wanted

question

Status: Open.

#65 In bids-apps/freesurfer;

· commandercool opened on Oct 3, 2020

community standards

enhancement

help wanted

question

Status: Open.

#61 In bids-apps/freesurfer;

· PeerHerholz opened on Jun 26, 2020

Parellelization

enhancement

question

Status: Open.

#58 In bids-apps/freesurfer;

· araikes opened on Jun 12, 2020

Support for CUDA

Status: Open.

#49 In bids-apps/freesurfer;

· vicmancr opened on Nov 6, 2019