feature: Read genetic distance data from the VCF directly. No map file necessary. #9
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…ted from the VCF file, rather that needing a genetic map and interpolating.
pettyalex
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shapeit4 output includes cM for each marker in the INFO column, like so:
This PR adds a new flag: vcf-has-cm, which will use the genetic position reported from the VCF file, rather that needing a genetic map and interpolating. This allows directly using the reported genetic position for each marker.
I know that you prefer email, so I'm sending one with more context.