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Merged
merged 5 commits into from
Nov 3, 2025
Merged

Release Delphi Epidata 4.1.37 #1682

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e044042
Merge pull request #1680 from cmu-delphi/bot/sync-main-dev
melange396 Oct 20, 2025
4256a68
chore: update docs
melange396 Oct 29, 2025
3035ca4
Merge pull request #1681 from cmu-delphi/bot/update-docs
melange396 Oct 29, 2025
c310789
Switch to new `flusurv` API endpoint (#1278)
nmdefries Oct 29, 2025
d6e4270
chore: release delphi-epidata 4.1.37
melange396 Nov 3, 2025
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2 changes: 1 addition & 1 deletion .bumpversion.cfg
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Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
[bumpversion]
current_version = 4.1.36
current_version = 4.1.37
commit = False
tag = False

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2 changes: 1 addition & 1 deletion dev/local/setup.cfg
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Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
[metadata]
name = Delphi Development
version = 4.1.36
version = 4.1.37

[options]
packages =
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55 changes: 39 additions & 16 deletions docs/api/flusurv.md
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Expand Up @@ -54,22 +54,45 @@ If neither is specified, the current issues are used.

## Response

| Field | Description | Type |
|--------------------------|-----------------------------------------------------------------|------------------|
| `result` | result code: 1 = success, 2 = too many results, -2 = no results | integer |
| `epidata` | list of results | array of objects |
| `epidata[].release_date` | | string |
| `epidata[].location` | | string |
| `epidata[].issue` | | integer |
| `epidata[].epiweek` | | integer |
| `epidata[].lag` | | integer |
| `epidata[].rate_age_0` | | float |
| `epidata[].rate_age_1` | | float |
| `epidata[].rate_age_2` | | float |
| `epidata[].rate_age_3` | | float |
| `epidata[].rate_age_4` | | float |
| `epidata[].rate_overall` | | float |
| `message` | `success` or error message | string |
| Field | Description | Type |
|---|---|---|
| `result` | result code: 1 = success, 2 = too many results, -2 = no results | integer |
| `epidata` | list of results | array of objects |
| `epidata[].release_date` | the date when this record was first received by Delphi | string |
| `epidata[].location` | the name of the catchment (e.g. 'network_all', 'CA', 'NY_albany' | string |
| `epidata[].issue` | the epiweek of receipt by Delphi (e.g. issue 201453 includes epiweeks up to and including 2014w53, but not 2015w01 or following) | integer |
| `epidata[].epiweek` | the epiweek during which the data was collected | integer |
| `epidata[].lag` | number of weeks between `epiweek` and `issue` | integer |
| `epidata[].rate_age_0` | hospitalization rate for ages 0-4 | float |
| `epidata[].rate_age_1` | hospitalization rate for ages 5-17 | float |
| `epidata[].rate_age_2` | hospitalization rate for ages 18-49 | float |
| `epidata[].rate_age_3` | hospitalization rate for ages 50-64 | float |
| `epidata[].rate_age_4` | hospitalization rate for ages 65+ | float |
| `epidata[].rate_overall` | overall hospitalization rate | float |
| `epidata[].rate_age_5` | hospitalization rate for ages 65-74 | float |
| `epidata[].rate_age_6` | hospitalization rate for ages 75-84 | float |
| `epidata[].rate_age_7` | hospitalization rate for ages 85+ | float |
| `epidata[].rate_age_18t29` | hospitalization rate for ages 18 to 29 | float |
| `epidata[].rate_age_30t39` | hospitalization rate for ages 30 to 39 | float |
| `epidata[].rate_age_40t49` | hospitalization rate for ages 40 to 49 | float |
| `epidata[].rate_age_5t11` | hospitalization rate for ages 5 to 11 | float |
| `epidata[].rate_age_12t17` | hospitalization rate for ages 12 to 17 | float |
| `epidata[].rate_age_lt18` | hospitalization rate for ages <18 | float |
| `epidata[].rate_age_gte18` | hospitalization rate for ages >=18 | float |
| `epidata[].rate_age_0tlt1` | hospitalization rate for ages 0-1 | float |
| `epidata[].rate_age_1t4` | hospitalization rate for ages 1-4 | float |
| `epidata[].rate_age_gte75` | hospitalization rate for ages >=75 | float |
| `epidata[].rate_race_white` | hospitalization rate for white people | float |
| `epidata[].rate_race_black` | hospitalization rate for black people | float |
| `epidata[].rate_race_hisp` | hospitalization rate for Hispanic/Latino people | float |
| `epidata[].rate_race_asian` | hospitalization rate for Asian people | float |
| `epidata[].rate_race_natamer` | hospitalization rate for American Indian/Alaskan Native people | float |
| `epidata[].rate_sex_male` | hospitalization rate for males | float |
| `epidata[].rate_sex_female` | hospitalization rate for females | float |
| `epidata[].rate_flu_a` | hospitalization rate for inflenza A | float |
| `epidata[].rate_flu_b` | hospitalization rate for inflenza B | float |
| `epidata[].season` | indicates the start and end years of the winter flu season in the format YYYY-YY (e.g. 2022-23 indicates the flu season running late 2022 through early 2023) | string |
| `message` | `success` or error message | string |

Notes:
* The `flusurv` age groups are, in general, not the same as the ILINet
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72 changes: 70 additions & 2 deletions integrations/server/test_flusurv.py
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Expand Up @@ -10,9 +10,54 @@ def localSetUp(self):

def test_flusurv(self):
"""Basic integration test for flusurv endpoint"""
# TODO: Should test out the whole pipeline, where we mock the source
# API by pulling more realistic data from a local JSON.
self.cur.execute(
"INSERT INTO `flusurv`(`release_date`, `issue`, `epiweek`, `location`, `lag`, `rate_age_0`, `rate_age_1`, `rate_age_2`, `rate_age_3`, `rate_age_4`, `rate_overall`, `rate_age_5`, `rate_age_6`, `rate_age_7`) VALUES(%s, %s, %s, %s, %s, %s, %s, %s, %s, %s, %s, %s, %s, %s)",
("2012-11-02", "201243", "201143", "CA", "52", "0", "0", "0", "0.151", "0", "0.029", "0", "0", "0"),
"""
INSERT INTO `flusurv`(
`release_date`,
`issue`,
`epiweek`,
`location`,
`lag`,
`rate_age_0`,
`rate_age_1`,
`rate_age_2`,
`rate_age_3`,
`rate_age_4`,
`rate_overall`,
`rate_age_5`,
`rate_age_6`,
`rate_age_7`,
`rate_age_18t29`,
`rate_age_30t39`,
`rate_age_40t49`,
`rate_age_5t11`,
`rate_age_12t17`,
`rate_age_lt18`,
`rate_age_gte18`,
`rate_age_1t4`,
`rate_age_gte75`,
`rate_age_0tlt1`,
`rate_race_white`,
`rate_race_black`,
`rate_race_hisp`,
`rate_race_asian`,
`rate_race_natamer`,
`rate_sex_male`,
`rate_sex_female`,
`rate_flu_a`,
`rate_flu_b`,
`season`
) VALUES(
%s, %s, %s, %s, %s, %s, %s, %s, %s, %s, %s, %s, %s, %s,
%s, %s, %s, %s, %s, %s, %s, %s, %s, %s, %s, %s, %s, %s, %s, %s, %s, %s, %s, %s
)
""",
(
"2012-11-02", 201243, 201143, "CA", 52, 0, 0, 0, 0.151, 0, 0.029, 0, 0, 0,
2.54, 0, 1, 0, 0, 0, 0, 0, 0.68, 0.46, 1, 1, 0, 0, 0, 99, 0, 0, 22.2, "2012-13"
),
)
self.cnx.commit()
response = self.epidata_client.flusurv(epiweeks=201143, locations="CA")
Expand All @@ -25,13 +70,36 @@ def test_flusurv(self):
"location": "CA",
"issue": 201243,
"epiweek": 201143,
"season": "2012-13",
"lag": 52,
"rate_age_0": 0.0,
"rate_age_1": 0.0,
"rate_age_2": 0.0,
"rate_age_3": 0.151,
"rate_age_4": 0.0,
"rate_overall": 0.029,
"rate_age_5": 0.0,
"rate_age_6": 0.0,
"rate_age_7": 0.0,
"rate_age_18t29": 2.54,
"rate_age_30t39": 0.0,
"rate_age_40t49": 1.0,
"rate_age_5t11": 0.0,
"rate_age_12t17": 0.0,
"rate_age_lt18": 0.0,
"rate_age_gte18": 0.0,
"rate_age_1t4": 0.0,
"rate_age_gte75": 0.68,
"rate_age_0tlt1": 0.46,
"rate_race_white": 1.0,
"rate_race_black": 1.0,
"rate_race_hisp": 0.0,
"rate_race_asian": 0.0,
"rate_race_natamer": 0.0,
"rate_sex_male": 99.0,
"rate_sex_female": 0.0,
"rate_flu_a": 0.0,
"rate_flu_b": 22.2,
}
],
"result": 1,
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