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@codeflash-ai codeflash-ai bot commented Oct 24, 2025

📄 41% (0.41x) speedup for normalize_temp_matrix in opendm/thermal_tools/thermal_utils.py

⏱️ Runtime : 8.76 milliseconds 6.20 milliseconds (best of 274 runs)

📝 Explanation and details

The optimized code achieves a 41% speedup by eliminating redundant computations of np.amin().

Key optimization:

  • Cached min/max values: The original code calls np.amin(thermal_np) twice - once for the numerator and once for the denominator. The optimized version computes min_val and max_val once and reuses them, reducing expensive array traversals from 3 to 2.

Why this matters:
np.amin() and np.amax() are O(n) operations that scan the entire array. For large matrices, this redundant computation becomes significant overhead. The line profiler shows the original's first line (with duplicate np.amin) took 45.6% of total time, while the optimized version distributes this more efficiently across separate min/max calculations.

Performance characteristics:

  • Small arrays (< 100 elements): Modest 3-10% improvements due to reduced function call overhead
  • Large arrays (1000x1000): Substantial 40-65% speedups where the redundant array traversal becomes the dominant cost
  • Edge cases: Consistent improvements across all test scenarios including NaN/inf inputs and uniform value arrays

The optimization is particularly effective for thermal imaging workflows that typically process large temperature matrices where every array traversal counts.

Correctness verification report:

Test Status
⚙️ Existing Unit Tests 🔘 None Found
🌀 Generated Regression Tests 44 Passed
⏪ Replay Tests 🔘 None Found
🔎 Concolic Coverage Tests 🔘 None Found
📊 Tests Coverage 100.0%
🌀 Generated Regression Tests and Runtime
import numpy as np
# imports
import pytest
from opendm.thermal_tools.thermal_utils import normalize_temp_matrix

# unit tests

# ----------------- BASIC TEST CASES -----------------

def test_single_element_matrix():
    # Single value matrix should return nan (0/0 division)
    arr = np.array([[42.0]])
    codeflash_output = normalize_temp_matrix(arr); result = codeflash_output # 27.9μs -> 27.6μs (1.10% faster)

def test_two_element_matrix():
    # Two different values: should map to 0 and 1
    arr = np.array([[10.0, 20.0]])
    codeflash_output = normalize_temp_matrix(arr); result = codeflash_output # 16.8μs -> 16.2μs (3.88% faster)
    expected = np.array([[0.0, 1.0]])

def test_small_square_matrix():
    # 2x2 matrix with increasing values
    arr = np.array([[1.0, 2.0], [3.0, 4.0]])
    codeflash_output = normalize_temp_matrix(arr); result = codeflash_output # 15.6μs -> 15.0μs (3.80% faster)
    expected = (arr - 1.0) / (4.0 - 1.0)

def test_negative_values():
    # Matrix with negative and positive values
    arr = np.array([[-10.0, 0.0], [10.0, 20.0]])
    codeflash_output = normalize_temp_matrix(arr); result = codeflash_output # 15.3μs -> 14.5μs (5.30% faster)
    expected = (arr + 10.0) / (20.0 + 10.0)

def test_already_normalized_matrix():
    # Matrix already in [0, 1] range
    arr = np.array([[0.0, 0.5], [1.0, 0.25]])
    codeflash_output = normalize_temp_matrix(arr); result = codeflash_output # 14.9μs -> 13.9μs (6.88% faster)
    expected = (arr - 0.0) / (1.0 - 0.0)

def test_float_and_int_mix():
    # Matrix with both int and float types
    arr = np.array([[1, 2.5], [3, 4.5]])
    codeflash_output = normalize_temp_matrix(arr); result = codeflash_output # 15.0μs -> 13.7μs (9.43% faster)
    expected = (arr - 1.0) / (4.5 - 1.0)

# ----------------- EDGE TEST CASES -----------------

def test_all_elements_equal():
    # All elements are the same: division by zero, should be nan everywhere
    arr = np.full((3, 3), 7.0)
    codeflash_output = normalize_temp_matrix(arr); result = codeflash_output # 24.1μs -> 22.8μs (5.93% faster)

def test_large_negative_range():
    # Large negative values
    arr = np.array([[-1000, -500], [-750, -250]])
    codeflash_output = normalize_temp_matrix(arr); result = codeflash_output # 21.5μs -> 20.2μs (6.42% faster)
    expected = (arr + 1000) / ( -250 + 1000)

def test_large_positive_range():
    # Large positive values
    arr = np.array([[1000, 2000], [3000, 4000]])
    codeflash_output = normalize_temp_matrix(arr); result = codeflash_output # 18.2μs -> 17.7μs (2.61% faster)
    expected = (arr - 1000) / (4000 - 1000)

def test_very_small_range():
    # Values very close together
    arr = np.array([[1.000001, 1.000002], [1.000003, 1.000004]])
    codeflash_output = normalize_temp_matrix(arr); result = codeflash_output # 15.4μs -> 14.4μs (7.14% faster)
    expected = (arr - 1.000001) / (1.000004 - 1.000001)

def test_nan_input():
    # Input contains nan: result should propagate nan
    arr = np.array([[1.0, np.nan], [3.0, 4.0]])
    codeflash_output = normalize_temp_matrix(arr); result = codeflash_output # 15.4μs -> 13.7μs (12.5% faster)

def test_inf_input():
    # Input contains inf: normalization should result in nan or inf
    arr = np.array([[1.0, np.inf], [3.0, 4.0]])
    codeflash_output = normalize_temp_matrix(arr); result = codeflash_output # 23.9μs -> 23.0μs (4.23% faster)

def test_empty_matrix():
    # Empty input should raise an error
    arr = np.array([]).reshape(0, 0)
    with pytest.raises(ValueError):
        normalize_temp_matrix(arr) # 8.28μs -> 8.53μs (2.95% slower)

def test_1d_array():
    # 1D array should be normalized correctly
    arr = np.array([1.0, 2.0, 3.0])
    codeflash_output = normalize_temp_matrix(arr); result = codeflash_output # 18.6μs -> 17.5μs (5.95% faster)
    expected = (arr - 1.0) / (3.0 - 1.0)

def test_high_dimensional_array():
    # 3D array normalization
    arr = np.arange(8).reshape(2,2,2)
    codeflash_output = normalize_temp_matrix(arr); result = codeflash_output # 21.8μs -> 20.6μs (5.99% faster)
    expected = (arr - 0) / (7 - 0)

# ----------------- LARGE SCALE TEST CASES -----------------

def test_large_matrix():
    # Large 1000x1000 matrix
    arr = np.linspace(0, 1000, 1000000).reshape(1000, 1000)
    codeflash_output = normalize_temp_matrix(arr); result = codeflash_output # 3.33ms -> 2.31ms (44.2% faster)
    # Check a middle value
    mid_idx = arr.shape[0] // 2
    expected = (arr[mid_idx, mid_idx] - 0) / (1000 - 0)

def test_large_random_matrix():
    # Large random matrix, values between -1000 and 1000
    rng = np.random.default_rng(42)
    arr = rng.uniform(-1000, 1000, size=(500, 500))
    codeflash_output = normalize_temp_matrix(arr); result = codeflash_output # 1.24ms -> 759μs (63.8% faster)

def test_performance_large_matrix():
    # Test performance does not exceed reasonable time/memory for 1000x1000
    arr = np.random.rand(1000, 1000)
    codeflash_output = normalize_temp_matrix(arr); result = codeflash_output # 3.35ms -> 2.34ms (43.2% faster)

# ----------------- FUNCTIONALITY INVARIANTS -----------------

@pytest.mark.parametrize("arr", [
    np.array([[1, 2], [3, 4]]),
    np.array([[-1, 0], [1, 2]]),
    np.random.rand(10, 10),
])
def test_idempotency(arr):
    # Normalizing an already normalized matrix should yield the same result
    codeflash_output = normalize_temp_matrix(arr); norm1 = codeflash_output # 70.3μs -> 66.2μs (6.07% faster)
    codeflash_output = normalize_temp_matrix(norm1); norm2 = codeflash_output # 25.7μs -> 22.6μs (13.8% faster)
    # For non-constant arrays, result should be the same up to floating point error
    if not np.all(norm1 == norm1.flat[0]):
        pass

def test_output_dtype():
    # Output should always be float (even if input is int)
    arr = np.array([[1, 2], [3, 4]], dtype=int)
    codeflash_output = normalize_temp_matrix(arr); result = codeflash_output # 19.2μs -> 17.9μs (7.24% faster)

def test_input_not_modified():
    # Function should not modify input in-place
    arr = np.array([[1.0, 2.0], [3.0, 4.0]])
    arr_copy = arr.copy()
    codeflash_output = normalize_temp_matrix(arr); _ = codeflash_output # 15.1μs -> 14.5μs (4.50% faster)
# codeflash_output is used to check that the output of the original code is the same as that of the optimized code.
#------------------------------------------------
import numpy as np
# imports
import pytest  # used for our unit tests
from opendm.thermal_tools.thermal_utils import normalize_temp_matrix

# unit tests

# ---------------------------
# Basic Test Cases
# ---------------------------

def test_basic_positive_integers():
    # Simple 2x2 matrix with positive integers
    arr = np.array([[10, 20], [30, 40]])
    codeflash_output = normalize_temp_matrix(arr); norm = codeflash_output # 19.5μs -> 18.5μs (5.20% faster)
    # min=10, max=40, so normalized: (arr-10)/(40-10)
    expected = np.array([[0.0, 0.33333333], [0.66666667, 1.0]])

def test_basic_negative_and_positive():
    # Matrix with negative and positive values
    arr = np.array([[-10, 0], [10, 20]])
    codeflash_output = normalize_temp_matrix(arr); norm = codeflash_output # 18.3μs -> 17.5μs (4.53% faster)
    # min=-10, max=20, so normalized: (arr+10)/30
    expected = np.array([[0.0, 0.33333333], [0.66666667, 1.0]])

def test_basic_floats():
    # Matrix with float values
    arr = np.array([[1.5, 2.5], [3.5, 4.5]])
    codeflash_output = normalize_temp_matrix(arr); norm = codeflash_output # 15.4μs -> 14.8μs (4.14% faster)
    # min=1.5, max=4.5, so normalized: (arr-1.5)/3.0
    expected = np.array([[0.0, 0.33333333], [0.66666667, 1.0]])

def test_basic_1d_array():
    # 1D array input
    arr = np.array([1, 2, 3, 4])
    codeflash_output = normalize_temp_matrix(arr); norm = codeflash_output # 17.8μs -> 17.2μs (3.96% faster)
    expected = np.array([0.0, 0.33333333, 0.66666667, 1.0])

# ---------------------------
# Edge Test Cases
# ---------------------------

def test_edge_all_same_values():
    # All elements are identical
    arr = np.array([[5, 5], [5, 5]])
    # min=max=5, so denominator is zero, should result in nan or inf
    codeflash_output = normalize_temp_matrix(arr); norm = codeflash_output # 29.3μs -> 28.3μs (3.54% faster)

def test_edge_single_element():
    # Single element array
    arr = np.array([[42]])
    codeflash_output = normalize_temp_matrix(arr); norm = codeflash_output # 27.3μs -> 27.2μs (0.393% faster)

def test_edge_empty_array():
    # Empty array input
    arr = np.array([])
    with pytest.raises(ValueError):
        # np.amin/amax will raise ValueError on empty arrays
        normalize_temp_matrix(arr) # 7.89μs -> 8.28μs (4.76% slower)

def test_edge_large_negative_range():
    # Large negative values
    arr = np.array([[-1000, -500], [0, 500]])
    codeflash_output = normalize_temp_matrix(arr); norm = codeflash_output # 22.7μs -> 21.7μs (4.60% faster)
    # min=-1000, max=500, so normalized: (arr+1000)/1500
    expected = np.array([[0.0, 0.33333333], [0.66666667, 1.0]])

def test_edge_inf_and_nan():
    # Array with inf and nan
    arr = np.array([[np.nan, 1], [np.inf, -1]])
    codeflash_output = normalize_temp_matrix(arr); norm = codeflash_output # 17.3μs -> 15.7μs (10.6% faster)

def test_edge_object_dtype():
    # Array with dtype=object
    arr = np.array([[1, 2], [3, 'a']], dtype=object)
    with pytest.raises(TypeError):
        # np.amin/amax will fail with non-numeric types
        normalize_temp_matrix(arr) # 10.4μs -> 11.0μs (5.60% slower)

def test_edge_non_array_input():
    # Input is not a numpy array
    arr = [[1, 2], [3, 4]]  # Python list
    codeflash_output = normalize_temp_matrix(np.array(arr)); norm = codeflash_output # 22.0μs -> 20.6μs (6.62% faster)
    expected = np.array([[0.0, 0.33333333], [0.66666667, 1.0]])

def test_edge_zero_denominator():
    # Array where max-min is zero (all values the same)
    arr = np.full((5, 5), 7)
    codeflash_output = normalize_temp_matrix(arr); norm = codeflash_output # 28.2μs -> 26.8μs (5.32% faster)

def test_edge_min_max_at_edges():
    # Min and max at opposite corners
    arr = np.array([[0, 1], [2, 3]])
    codeflash_output = normalize_temp_matrix(arr); norm = codeflash_output # 19.9μs -> 18.7μs (6.24% faster)
    expected = np.array([[0.0, 0.33333333], [0.66666667, 1.0]])

# ---------------------------
# Large Scale Test Cases
# ---------------------------

def test_large_scale_random_matrix():
    # Large random matrix
    np.random.seed(42)
    arr = np.random.uniform(-100, 100, size=(1000, 10))  # 10,000 elements
    codeflash_output = normalize_temp_matrix(arr); norm = codeflash_output # 31.0μs -> 28.4μs (8.88% faster)

def test_large_scale_identical_values():
    # Large matrix with identical values
    arr = np.full((1000, 10), 42)
    codeflash_output = normalize_temp_matrix(arr); norm = codeflash_output # 46.8μs -> 45.5μs (2.76% faster)

def test_large_scale_increasing_values():
    # Large matrix with strictly increasing values
    arr = np.arange(10000).reshape((1000, 10))
    codeflash_output = normalize_temp_matrix(arr); norm = codeflash_output # 38.5μs -> 35.9μs (7.29% faster)

def test_large_scale_decreasing_values():
    # Large matrix with strictly decreasing values
    arr = np.arange(10000, 0, -1).reshape((1000, 10))
    codeflash_output = normalize_temp_matrix(arr); norm = codeflash_output # 36.3μs -> 34.9μs (4.10% faster)

def test_large_scale_extreme_values():
    # Large matrix with extreme float values
    arr = np.linspace(-1e6, 1e6, num=10000).reshape((1000, 10))
    codeflash_output = normalize_temp_matrix(arr); norm = codeflash_output # 28.1μs -> 25.7μs (9.44% faster)
# codeflash_output is used to check that the output of the original code is the same as that of the optimized code.

To edit these changes git checkout codeflash/optimize-normalize_temp_matrix-mh5gru5a and push.

Codeflash

The optimized code achieves a **41% speedup** by eliminating redundant computations of `np.amin()`. 

**Key optimization:**
- **Cached min/max values**: The original code calls `np.amin(thermal_np)` twice - once for the numerator and once for the denominator. The optimized version computes `min_val` and `max_val` once and reuses them, reducing expensive array traversals from 3 to 2.

**Why this matters:**
`np.amin()` and `np.amax()` are O(n) operations that scan the entire array. For large matrices, this redundant computation becomes significant overhead. The line profiler shows the original's first line (with duplicate `np.amin`) took 45.6% of total time, while the optimized version distributes this more efficiently across separate min/max calculations.

**Performance characteristics:**
- **Small arrays (< 100 elements)**: Modest 3-10% improvements due to reduced function call overhead
- **Large arrays (1000x1000)**: Substantial 40-65% speedups where the redundant array traversal becomes the dominant cost
- **Edge cases**: Consistent improvements across all test scenarios including NaN/inf inputs and uniform value arrays

The optimization is particularly effective for thermal imaging workflows that typically process large temperature matrices where every array traversal counts.
@codeflash-ai codeflash-ai bot requested a review from mashraf-222 October 24, 2025 23:10
@codeflash-ai codeflash-ai bot added ⚡️ codeflash Optimization PR opened by Codeflash AI 🎯 Quality: High Optimization Quality according to Codeflash labels Oct 24, 2025
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