Skip to content
@compbiomed

Section of Computational Biomedicine

Making Translational Bioinformatics Go Faster

Pinned Loading

  1. celda Public

    Bayesian Hierarchical Modeling for Clustering Single Cell Genomic Data

    R 48 14

  2. singleCellTK Public

    Interactively analyze single cell genomic data

    R 181 78

  3. enrichR Public

    A hacky little interface to call the Enrichr functional enrichment tool from R.

    R 12 9

Repositories

Showing 10 of 18 repositories
  • singleCellTK Public

    Interactively analyze single cell genomic data

    R 181 78 8 1 Updated Jan 14, 2025
  • gsea-cli-scripts Public

    Scripts for running GSEA at the command line

    R 0 2 0 0 Updated Aug 21, 2024
  • RNA_Seq Public

    Nextflow pipeline for preprocessing RNA sequencing data.

    Nextflow 5 5 1 1 Updated May 16, 2024
  • singleCellTKPlus Public

    Includes extra tools in the singleCellTK framework that are not available in standard repositories

    R 0 1 0 1 Updated Jul 5, 2023
  • genome-reference-scripts Public

    Scripts for creating genome references (FASTA, STAR, etc.)

    Shell 1 0 2 0 Updated May 20, 2023
  • data-transfer-scripts Public

    Scripts for facilitating or carrying out data transfers

    Shell 0 0 0 0 Updated Nov 12, 2022
  • basespace-cli-scripts Public

    Bash wrapper scripts for working with the BaseSpace command-line interface (CLI)

    Shell 1 0 0 0 Updated Oct 23, 2021
  • microscopy-image-scripts Public

    Scripts for working with microscopy image files (SVS, etc.)

    Shell 0 0 0 0 Updated Aug 4, 2021
  • Dockerfile 0 0 0 0 Updated Oct 9, 2020
  • R 0 0 0 0 Updated Aug 13, 2019

People

This organization has no public members. You must be a member to see who’s a part of this organization.