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Poterek exercise 11 solution #5

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20 changes: 20 additions & 0 deletions ex11_1.sh
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#!/bin/bash
#Marya Poterek

#Question 1

for file in spore*
do
cat $file >> spore_all.fasta
echo >> spore_all.fasta
done

/Users/mlpoterek/Biocomp/muscle3.8.31_i86darwin32 -in spore_all.fasta -out spore.align

for file in transporter*
do
cat $file >> transporter_all.fasta
echo >> transporter_all.fasta
done

/Users/mlpoterek/Biocomp/muscle3.8.31_i86darwin32 -in transporter_all.fasta -out transporter.align
19 changes: 19 additions & 0 deletions ex11_2.sh
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#!/bin/bash
#Marya Poterek

#Question 2

/afs/nd.edu/user8/mpoterek/local/bin/hmmbuild transporter.hmm transporter.align

for file in /afs/nd.edu/user8/mpoterek/proteomes/*.fasta
do
/afs/nd.edu/user8/mpoterek/local/bin/hmmsearch --tblout $file.hmm.out transporter.hmm $file
done

for file in /afs/nd.edu/user8/mpoterek/proteomes/*.hmm.out
do
a=$(basename $file)
b=`basename $a .fasta.hmm.out`
echo $b >> hmm_hits.txt
grep -v '#' $file | wc -l >> hmm_hits.txt
done
Empty file added gene_sequences/A9CH19_A
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Empty file.
20 changes: 20 additions & 0 deletions gene_sequences/ex11.sh
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Original file line number Diff line number Diff line change
@@ -0,0 +1,20 @@
#!/bin/bash
#Marya Poterek

#Question 1

for file in spore*
do
cat $file >> spore_all.fasta
echo >> spore_all.fasta
done

/Users/mlpoterek/Biocomp/muscle3.8.31_i86darwin32 -in spore_all.fasta -out spore.align

for file in transporter*
do
cat $file >> transporter_all.fasta
echo >> transporter_all.fasta
done

/Users/mlpoterek/Biocomp/muscle3.8.31_i86darwin32 -in transporter_all.fasta -out transporter.align
103 changes: 103 additions & 0 deletions gene_sequences/finalfile.txt
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>Q8XVY0_RALSO/26164
TTTTFSVSTTVNATCVINSASALTFAAFDPSQGAQASTSSISVNCTNTTPFNIGLNAGTGTGATVASRVMTSGANTLTYSLYQDSGHASVWGNTVGTNTVAGTGAGMAAGNAITKTVYGLIPSQPNTVPGNYADTVTVT
>Q0BSH7_GRABC/37169
TTTTFQVTATVQASCIIQATNLSFGNYSGSQTDATSTIQVTCTNSTPYNVGLSAGTGSGATVSNRKMSLNSTSALPYALYSDASRSTNWGNTPNQDTVSGTGNGSAQSLTVYGRIQTGNYPTPGSYADTITAT
>Q0AAK3_ALKEH/24160
DTATFDVTATVDPTCTVDADNLVFGTYDPFSDTPLDENSEIRVQCTSDTPYDIGLDDGDNTGAEGERRMALADESDFLEYDLYHDNHGGTSWGDIDSGAELTGLSGTGSEQSYVVYGRIFAEQSVAVGNYVDTIEVT
>Q8XPY6_RALSO/36170
KTTTFTVSLTLQADCSISANALNFGTQGVLAANVDQTATLSVTCSNTAPYNVGFDAGTTTGSTIAARLLAGSGAATVGFQLYSDSARTQIWGNTVGTDTVSGTGSGTAQVLTVYGRVPSQNSPAAGTYSTTITAT
>Q63W79_BURPS/31169
ATATFTVSLTIQANCTISANALSFGTNGVLATAVNQQTTLSVTCSNTTSYNVGLDAGNVSGSTVSSRLLAGTTTGNTSTTVSFQLYQDSGHTTIWGNTVGTNTVSGTGNGTAQTLSVYGQVPAQTTPKPDTYESTVTAT>Q7CVQ4_AGRFC/27162
ATTNFNVQITIQAACQINSAGNLDFGTNGVIGAPIDVTSQIVVQCTASTPFSLGLSAGAGSGATVANRLMTSAAGATISYSLYTTAAHSTVWGNTVGTDRQTGTGTGAPQNFTVFGRVPAQTTPAVGVYTDTVTAT
>Q985D5_RHILO/27162
ATGNMTVRITIQAECKVQTATDMDFGTNGVIDANVDQTSTISVQCTNSTPYNVGLSAGVGAGATVAVRKMTGPAAAVLNYSLYRDVARAQLWGTTIGTDTVAGTGNGAAQPLTVYGRVPPQTTPGAGVYTDTVAIT
>A6X8A6_OCHA4/27162
ATGNMNVRITIQAECKIVTATDLDFGTKGVIDVNVDQTSTISVQCTNGTPYTVGLSAGGGAGATVAMRKMTGAASATINYTIYRDAARTQVWGVTAGTDVVSGTGNGNAQSITAYGRVPAQTTPAPGVYSDVVSVT
>A9CH19_AGRFC/182313
TQVPFTVSAAVAPTCIISAQNINFGSHGVLNTAVDANGAINLTCTNGLNYSVALNGGLSNSPPAARQMVQGAASIIYGLYRDVSRTNVWGSAAGQIATGTGNGSLQTLTVFGRVPAQNTPAPGNYADTVVVT
>Q985D8_RHILO/205338
DRPTFTINAIVPANCLLAIQNIDFGSNGILGANVDATGGVSITCTPGTPYTVSLSNGTTGSAPTARKMSKGVETVTYGLYKDNARSQVWGDAAMPGSTVAGSGSGAAQNLTIYGRVPAQTTPSAGVYTDTVVVT
>A7H7Q6_ANADF/25150
ATAQFQVTATVVKKCKISATTIAFGNYDPATILSAEGTLTLKCTKGTLYSVALDGGSTGSRQMTQAAEVLDYELYSDAGHTAVWPSTAAAPSVAAAGADEALIIFAQVPADQYPAPGAYADTVTAT
>Q2IFL0_ANADE/27162
ATATLDVTATVVPSCTIAATPVAFGSYDPLVTNAATALDAQGTVTVTCTTGTAYTVGLGAGNSGSGSRAMQHASIAGAQLPYELYQEAARTTVWDSTVMQAGTAASITPVQYTVYGRIPAAQNVPTGNYADAVVAT
>Q0C623_HYPNA/23151
ANGTLDVQATVVNTCVVLTAPVVFASVGLDEVTANGSITVNCTNTSAFTVALDGGDSGDISARSLTHASLPASFNYQLYTDAGLTTVWGDGVTGSQANGSGPSQTLTVYGRTTSTPDTAGAYADEVQVT
>Q63W78_BURPS/193326
TFAFTASATVVNDCFINATNVAFGSTGVIQGALTATGTISAQCTNGDAFRIALNGGASGNVAARAMQRTGGGGAVNYQLYLDAAHSTIWGDGTAGTSTATGTGSGLSQSLTVYGQVPAQTTPAPGTYSDTITAT
>Q8XVY3_RALSO/23163
VLVALASWAPGALAVSCSVSANALSFGAYNTTSNLTGTTTVTITCGAWGGASSINYTLSASVGSGTYANRQVLNGSNVIAYNLYTTSADTSIWGDGNGDGTVTLSGTVTKQVGTVNLTIYGKINGGQNVVPGSYATTIPIT
>Q8XPY9_RALSO/25163
ASAQSCSVASASLNFGSISPVQAGNTDTSTTLTVSCSGFLLQGTVARACLNLGVGSGDTGISPRVLSAGANQLQYNLYADSARSVVWGGRTTPATPAIQVDVSLGLLGFGSATVTVYGRVPGGQTTVPAGAYTQSFSGT>A9CH19_AGRFC/11158
IAAAFVASPVLAQSCTFSMSDMNFGFVNLAGGAAVDTTATLSVTCNNPLSLALSIRICPNINAGGGGQSGGIRRMLQGSNILNYQLYQTSARTTAWGSVTQPALGAPPPIDMALPLLINSTTRTVYGRINAGQASAARGLYLSSFAGG
>Q985D8_RHILO/37183
SAALLLPTVAWAQSCSFGVSAMNFGLVDTLSGSSSNSTATLSVNCTGLLLQRILVCPNLGTGSGGATASARQMLSGANDLNYQLYSDSARSVVWGSYAWPYPPTAPGFALTLNVLGSGSASQTIYGAILGGQATAVPSTYLSTFSGS
>Q3A2W0_PELCD/10150
IIVLLFAVDAYAFHCEVTTTPVSFGAYDVFSSFSLDTTGRISVSCNNPEKKRMPVTISISRGAANSFSPRQMRRIGGSDRMDYYLFVDASRTAVWGDGTGGSSTYVGMIDRTSPLNVPIYGRIPARQNLRAGSYQDILVVT>A7H7Q5_ANADF/16150
APRAVDAAQPPSPGPSCSVSAGSVAFGAYDPLSPTHLDSTGTIGLTCAVRQLVTISLGTGQSGTFARELRGPGGAALRYDLYTDATRTQVWGDGTAGTATWPFETERGRYVPVYARVLAGQDVPAGPYSDTIVVT
>Q2IFK8_ANADE/19157
ATALSLVAPAAARAASCSLTMGTSIAFGAYDPLSPVPLTTTGMLQYRCSRGQPIRITFTAGSSGDVYARTLRQGPWTLAYNLYADAGFGTVWGDGTGGTAAAPAVTTLSNGLTVAYVFGRIPARQEPPVGPYSDTIVVT
>Q1D5L1_MYXXD/13153
AVAGVCGLLPGLAGAVCQIRSTIGVSFGTYLTTDLLPRDSAGSITYRCEGQITPITIDFSAGGSGTPLARSMAGPGAQRLEYNLYVDATRLIVWGNGTSGTGRYGPVVPLFGVEVTVPIFGRIPAGQAIPAGAYADTVVMT
>Q60C08_METCA/20167
LLACPKISDADPYQCDIGNISVPHAVYDPTDSNPNSSGVGTVGITCHLKNAKQTQQVQYTIALSRGSSGSYNPRRMSGGRGSLGYNLYLDAARVTIWGDGSGGTFPLRGTLLLNPTTPVQQVIHNIYGLIPPLQDVYAGTYTDTVTIT
>Q0AAK6_ALKEH/8153
SLFLVAAGSGSAQAYTCSISADPLAFGQYDPITGAQVDGASEVSVSCSLLGLVSLLVSYEISLDPGTGGSYHPRALSSATDTLDYNLYVDTARTEIWGDGTDDTATVTDSYTLGVLTVTRYYPVYGRVFADQNVAAGVYDDTITAT
>Q12FX3_POLSJ/50194
TWGVLLAAGTAHATISCSVSGNGFTSVYDPISTVPNDNVSSVTINCSRASGDPTTTTYSLASTNGLYPQGQNNRAYYPTNKYLKYDIYKDAAYSSRWGPGGSAPFTGTLNFGSGTSASLTLPYYNRVAAQQSAVAADYTDTMTAT
>A1VIJ0_POLNA/19170
ALFLLLATAGPAQAGSCTVGSSGLAFGAYQPLTFAGKLTSSAVTSNASISVVCTGIASGGAYSIALGPSTTGSGDRISTRYLGNSNGGDDMSFNIYTSASYSTVWGNGTTGGLVGGSIPVGDSNQSQPVYGRIAASQNTLRAGSYSGSLTMT

>Q8XVY0_RALSO/26164
TTTTFSVSTTVNATCVINSASALTFAAFDPSQGAQASTSSISVNCTNTTPFNIGLNAGTGTGATVASRVMTSGANTLTYSLYQDSGHASVWGNTVGTNTVAGTGAGMAAGNAITKTVYGLIPSQPNTVPGNYADTVTVT
>Q0BSH7_GRABC/37169
TTTTFQVTATVQASCIIQATNLSFGNYSGSQTDATSTIQVTCTNSTPYNVGLSAGTGSGATVSNRKMSLNSTSALPYALYSDASRSTNWGNTPNQDTVSGTGNGSAQSLTVYGRIQTGNYPTPGSYADTITAT
>Q0AAK3_ALKEH/24160
DTATFDVTATVDPTCTVDADNLVFGTYDPFSDTPLDENSEIRVQCTSDTPYDIGLDDGDNTGAEGERRMALADESDFLEYDLYHDNHGGTSWGDIDSGAELTGLSGTGSEQSYVVYGRIFAEQSVAVGNYVDTIEVT
>Q8XPY6_RALSO/36170
KTTTFTVSLTLQADCSISANALNFGTQGVLAANVDQTATLSVTCSNTAPYNVGFDAGTTTGSTIAARLLAGSGAATVGFQLYSDSARTQIWGNTVGTDTVSGTGSGTAQVLTVYGRVPSQNSPAAGTYSTTITAT
>Q63W79_BURPS/31169
ATATFTVSLTIQANCTISANALSFGTNGVLATAVNQQTTLSVTCSNTTSYNVGLDAGNVSGSTVSSRLLAGTTTGNTSTTVSFQLYQDSGHTTIWGNTVGTNTVSGTGNGTAQTLSVYGQVPAQTTPKPDTYESTVTAT
>Q7CVQ4_AGRFC/27162
ATTNFNVQITIQAACQINSAGNLDFGTNGVIGAPIDVTSQIVVQCTASTPFSLGLSAGAGSGATVANRLMTSAAGATISYSLYTTAAHSTVWGNTVGTDRQTGTGTGAPQNFTVFGRVPAQTTPAVGVYTDTVTAT
>Q985D5_RHILO/27162
ATGNMTVRITIQAECKVQTATDMDFGTNGVIDANVDQTSTISVQCTNSTPYNVGLSAGVGAGATVAVRKMTGPAAAVLNYSLYRDVARAQLWGTTIGTDTVAGTGNGAAQPLTVYGRVPPQTTPGAGVYTDTVAIT
>A6X8A6_OCHA4/27162
ATGNMNVRITIQAECKIVTATDLDFGTKGVIDVNVDQTSTISVQCTNGTPYTVGLSAGGGAGATVAMRKMTGAASATINYTIYRDAARTQVWGVTAGTDVVSGTGNGNAQSITAYGRVPAQTTPAPGVYSDVVSVT
>A9CH19_AGRFC/182313
TQVPFTVSAAVAPTCIISAQNINFGSHGVLNTAVDANGAINLTCTNGLNYSVALNGGLSNSPPAARQMVQGAASIIYGLYRDVSRTNVWGSAAGQIATGTGNGSLQTLTVFGRVPAQNTPAPGNYADTVVVT
>Q985D8_RHILO/205338
DRPTFTINAIVPANCLLAIQNIDFGSNGILGANVDATGGVSITCTPGTPYTVSLSNGTTGSAPTARKMSKGVETVTYGLYKDNARSQVWGDAAMPGSTVAGSGSGAAQNLTIYGRVPAQTTPSAGVYTDTVVVT
>A7H7Q6_ANADF/25150
ATAQFQVTATVVKKCKISATTIAFGNYDPATILSAEGTLTLKCTKGTLYSVALDGGSTGSRQMTQAAEVLDYELYSDAGHTAVWPSTAAAPSVAAAGADEALIIFAQVPADQYPAPGAYADTVTAT
>Q2IFL0_ANADE/27162
ATATLDVTATVVPSCTIAATPVAFGSYDPLVTNAATALDAQGTVTVTCTTGTAYTVGLGAGNSGSGSRAMQHASIAGAQLPYELYQEAARTTVWDSTVMQAGTAASITPVQYTVYGRIPAAQNVPTGNYADAVVAT
>Q0C623_HYPNA/23151
ANGTLDVQATVVNTCVVLTAPVVFASVGLDEVTANGSITVNCTNTSAFTVALDGGDSGDISARSLTHASLPASFNYQLYTDAGLTTVWGDGVTGSQANGSGPSQTLTVYGRTTSTPDTAGAYADEVQVT
>Q63W78_BURPS/193326
TFAFTASATVVNDCFINATNVAFGSTGVIQGALTATGTISAQCTNGDAFRIALNGGASGNVAARAMQRTGGGGAVNYQLYLDAAHSTIWGDGTAGTSTATGTGSGLSQSLTVYGQVPAQTTPAPGTYSDTITAT
>Q8XVY3_RALSO/23163
VLVALASWAPGALAVSCSVSANALSFGAYNTTSNLTGTTTVTITCGAWGGASSINYTLSASVGSGTYANRQVLNGSNVIAYNLYTTSADTSIWGDGNGDGTVTLSGTVTKQVGTVNLTIYGKINGGQNVVPGSYATTIPIT
>Q8XPY9_RALSO/25163
ASAQSCSVASASLNFGSISPVQAGNTDTSTTLTVSCSGFLLQGTVARACLNLGVGSGDTGISPRVLSAGANQLQYNLYADSARSVVWGGRTTPATPAIQVDVSLGLLGFGSATVTVYGRVPGGQTTVPAGAYTQSFSGT
>A9CH19_AGRFC/11158
IAAAFVASPVLAQSCTFSMSDMNFGFVNLAGGAAVDTTATLSVTCNNPLSLALSIRICPNINAGGGGQSGGIRRMLQGSNILNYQLYQTSARTTAWGSVTQPALGAPPPIDMALPLLINSTTRTVYGRINAGQASAARGLYLSSFAGG
>Q985D8_RHILO/37183
SAALLLPTVAWAQSCSFGVSAMNFGLVDTLSGSSSNSTATLSVNCTGLLLQRILVCPNLGTGSGGATASARQMLSGANDLNYQLYSDSARSVVWGSYAWPYPPTAPGFALTLNVLGSGSASQTIYGAILGGQATAVPSTYLSTFSGS
>Q3A2W0_PELCD/10150
IIVLLFAVDAYAFHCEVTTTPVSFGAYDVFSSFSLDTTGRISVSCNNPEKKRMPVTISISRGAANSFSPRQMRRIGGSDRMDYYLFVDASRTAVWGDGTGGSSTYVGMIDRTSPLNVPIYGRIPARQNLRAGSYQDILVVT
>A7H7Q5_ANADF/16150
APRAVDAAQPPSPGPSCSVSAGSVAFGAYDPLSPTHLDSTGTIGLTCAVRQLVTISLGTGQSGTFARELRGPGGAALRYDLYTDATRTQVWGDGTAGTATWPFETERGRYVPVYARVLAGQDVPAGPYSDTIVVT
>Q2IFK8_ANADE/19157
ATALSLVAPAAARAASCSLTMGTSIAFGAYDPLSPVPLTTTGMLQYRCSRGQPIRITFTAGSSGDVYARTLRQGPWTLAYNLYADAGFGTVWGDGTGGTAAAPAVTTLSNGLTVAYVFGRIPARQEPPVGPYSDTIVVT
>Q1D5L1_MYXXD/13153
AVAGVCGLLPGLAGAVCQIRSTIGVSFGTYLTTDLLPRDSAGSITYRCEGQITPITIDFSAGGSGTPLARSMAGPGAQRLEYNLYVDATRLIVWGNGTSGTGRYGPVVPLFGVEVTVPIFGRIPAGQAIPAGAYADTVVMT
>Q60C08_METCA/20167
LLACPKISDADPYQCDIGNISVPHAVYDPTDSNPNSSGVGTVGITCHLKNAKQTQQVQYTIALSRGSSGSYNPRRMSGGRGSLGYNLYLDAARVTIWGDGSGGTFPLRGTLLLNPTTPVQQVIHNIYGLIPPLQDVYAGTYTDTVTIT
>Q0AAK6_ALKEH/8153
SLFLVAAGSGSAQAYTCSISADPLAFGQYDPITGAQVDGASEVSVSCSLLGLVSLLVSYEISLDPGTGGSYHPRALSSATDTLDYNLYVDTARTEIWGDGTDDTATVTDSYTLGVLTVTRYYPVYGRVFADQNVAAGVYDDTITAT
>Q12FX3_POLSJ/50194
TWGVLLAAGTAHATISCSVSGNGFTSVYDPISTVPNDNVSSVTINCSRASGDPTTTTYSLASTNGLYPQGQNNRAYYPTNKYLKYDIYKDAAYSSRWGPGGSAPFTGTLNFGSGTSASLTLPYYNRVAAQQSAVAADYTDTMTAT
>A1VIJ0_POLNA/19170
ALFLLLATAGPAQAGSCTVGSSGLAFGAYQPLTFAGKLTSSAVTSNASISVVCTGIASGGAYSIALGPSTTGSGDRISTRYLGNSNGGDDMSFNIYTSASYSTVWGNGTTGGLVGGSIPVGDSNQSQPVYGRIAASQNTLRAGSYSGSLTMT

101 changes: 101 additions & 0 deletions gene_sequences/newfile
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>Q8XVY0_RALSO/26164
TTTTFSVSTTVNATCVINSASALTFAAFDPSQGAQASTSSISVNCTNTTPFNIGLNAGTGTGATVASRVMTSGANTLTYSLYQDSGHASVWGNTVGTNTVAGTGAGMAAGNAITKTVYGLIPSQPNTVPGNYADTVTVT
>Q0BSH7_GRABC/37169
TTTTFQVTATVQASCIIQATNLSFGNYSGSQTDATSTIQVTCTNSTPYNVGLSAGTGSGATVSNRKMSLNSTSALPYALYSDASRSTNWGNTPNQDTVSGTGNGSAQSLTVYGRIQTGNYPTPGSYADTITAT
>Q0AAK3_ALKEH/24160
DTATFDVTATVDPTCTVDADNLVFGTYDPFSDTPLDENSEIRVQCTSDTPYDIGLDDGDNTGAEGERRMALADESDFLEYDLYHDNHGGTSWGDIDSGAELTGLSGTGSEQSYVVYGRIFAEQSVAVGNYVDTIEVT
>Q8XPY6_RALSO/36170
KTTTFTVSLTLQADCSISANALNFGTQGVLAANVDQTATLSVTCSNTAPYNVGFDAGTTTGSTIAARLLAGSGAATVGFQLYSDSARTQIWGNTVGTDTVSGTGSGTAQVLTVYGRVPSQNSPAAGTYSTTITAT
>Q63W79_BURPS/31169
ATATFTVSLTIQANCTISANALSFGTNGVLATAVNQQTTLSVTCSNTTSYNVGLDAGNVSGSTVSSRLLAGTTTGNTSTTVSFQLYQDSGHTTIWGNTVGTNTVSGTGNGTAQTLSVYGQVPAQTTPKPDTYESTVTAT>Q7CVQ4_AGRFC/27162
ATTNFNVQITIQAACQINSAGNLDFGTNGVIGAPIDVTSQIVVQCTASTPFSLGLSAGAGSGATVANRLMTSAAGATISYSLYTTAAHSTVWGNTVGTDRQTGTGTGAPQNFTVFGRVPAQTTPAVGVYTDTVTAT
>Q985D5_RHILO/27162
ATGNMTVRITIQAECKVQTATDMDFGTNGVIDANVDQTSTISVQCTNSTPYNVGLSAGVGAGATVAVRKMTGPAAAVLNYSLYRDVARAQLWGTTIGTDTVAGTGNGAAQPLTVYGRVPPQTTPGAGVYTDTVAIT
>A6X8A6_OCHA4/27162
ATGNMNVRITIQAECKIVTATDLDFGTKGVIDVNVDQTSTISVQCTNGTPYTVGLSAGGGAGATVAMRKMTGAASATINYTIYRDAARTQVWGVTAGTDVVSGTGNGNAQSITAYGRVPAQTTPAPGVYSDVVSVT
>A9CH19_AGRFC/182313
TQVPFTVSAAVAPTCIISAQNINFGSHGVLNTAVDANGAINLTCTNGLNYSVALNGGLSNSPPAARQMVQGAASIIYGLYRDVSRTNVWGSAAGQIATGTGNGSLQTLTVFGRVPAQNTPAPGNYADTVVVT
>Q985D8_RHILO/205338
DRPTFTINAIVPANCLLAIQNIDFGSNGILGANVDATGGVSITCTPGTPYTVSLSNGTTGSAPTARKMSKGVETVTYGLYKDNARSQVWGDAAMPGSTVAGSGSGAAQNLTIYGRVPAQTTPSAGVYTDTVVVT
>A7H7Q6_ANADF/25150
ATAQFQVTATVVKKCKISATTIAFGNYDPATILSAEGTLTLKCTKGTLYSVALDGGSTGSRQMTQAAEVLDYELYSDAGHTAVWPSTAAAPSVAAAGADEALIIFAQVPADQYPAPGAYADTVTAT
>Q2IFL0_ANADE/27162
ATATLDVTATVVPSCTIAATPVAFGSYDPLVTNAATALDAQGTVTVTCTTGTAYTVGLGAGNSGSGSRAMQHASIAGAQLPYELYQEAARTTVWDSTVMQAGTAASITPVQYTVYGRIPAAQNVPTGNYADAVVAT
>Q0C623_HYPNA/23151
ANGTLDVQATVVNTCVVLTAPVVFASVGLDEVTANGSITVNCTNTSAFTVALDGGDSGDISARSLTHASLPASFNYQLYTDAGLTTVWGDGVTGSQANGSGPSQTLTVYGRTTSTPDTAGAYADEVQVT
>Q63W78_BURPS/193326
TFAFTASATVVNDCFINATNVAFGSTGVIQGALTATGTISAQCTNGDAFRIALNGGASGNVAARAMQRTGGGGAVNYQLYLDAAHSTIWGDGTAGTSTATGTGSGLSQSLTVYGQVPAQTTPAPGTYSDTITAT
>Q8XVY3_RALSO/23163
VLVALASWAPGALAVSCSVSANALSFGAYNTTSNLTGTTTVTITCGAWGGASSINYTLSASVGSGTYANRQVLNGSNVIAYNLYTTSADTSIWGDGNGDGTVTLSGTVTKQVGTVNLTIYGKINGGQNVVPGSYATTIPIT
>Q8XPY9_RALSO/25163
ASAQSCSVASASLNFGSISPVQAGNTDTSTTLTVSCSGFLLQGTVARACLNLGVGSGDTGISPRVLSAGANQLQYNLYADSARSVVWGGRTTPATPAIQVDVSLGLLGFGSATVTVYGRVPGGQTTVPAGAYTQSFSGT>A9CH19_AGRFC/11158
IAAAFVASPVLAQSCTFSMSDMNFGFVNLAGGAAVDTTATLSVTCNNPLSLALSIRICPNINAGGGGQSGGIRRMLQGSNILNYQLYQTSARTTAWGSVTQPALGAPPPIDMALPLLINSTTRTVYGRINAGQASAARGLYLSSFAGG
>Q985D8_RHILO/37183
SAALLLPTVAWAQSCSFGVSAMNFGLVDTLSGSSSNSTATLSVNCTGLLLQRILVCPNLGTGSGGATASARQMLSGANDLNYQLYSDSARSVVWGSYAWPYPPTAPGFALTLNVLGSGSASQTIYGAILGGQATAVPSTYLSTFSGS
>Q3A2W0_PELCD/10150
IIVLLFAVDAYAFHCEVTTTPVSFGAYDVFSSFSLDTTGRISVSCNNPEKKRMPVTISISRGAANSFSPRQMRRIGGSDRMDYYLFVDASRTAVWGDGTGGSSTYVGMIDRTSPLNVPIYGRIPARQNLRAGSYQDILVVT>A7H7Q5_ANADF/16150
APRAVDAAQPPSPGPSCSVSAGSVAFGAYDPLSPTHLDSTGTIGLTCAVRQLVTISLGTGQSGTFARELRGPGGAALRYDLYTDATRTQVWGDGTAGTATWPFETERGRYVPVYARVLAGQDVPAGPYSDTIVVT
>Q2IFK8_ANADE/19157
ATALSLVAPAAARAASCSLTMGTSIAFGAYDPLSPVPLTTTGMLQYRCSRGQPIRITFTAGSSGDVYARTLRQGPWTLAYNLYADAGFGTVWGDGTGGTAAAPAVTTLSNGLTVAYVFGRIPARQEPPVGPYSDTIVVT
>Q1D5L1_MYXXD/13153
AVAGVCGLLPGLAGAVCQIRSTIGVSFGTYLTTDLLPRDSAGSITYRCEGQITPITIDFSAGGSGTPLARSMAGPGAQRLEYNLYVDATRLIVWGNGTSGTGRYGPVVPLFGVEVTVPIFGRIPAGQAIPAGAYADTVVMT
>Q60C08_METCA/20167
LLACPKISDADPYQCDIGNISVPHAVYDPTDSNPNSSGVGTVGITCHLKNAKQTQQVQYTIALSRGSSGSYNPRRMSGGRGSLGYNLYLDAARVTIWGDGSGGTFPLRGTLLLNPTTPVQQVIHNIYGLIPPLQDVYAGTYTDTVTIT
>Q0AAK6_ALKEH/8153
SLFLVAAGSGSAQAYTCSISADPLAFGQYDPITGAQVDGASEVSVSCSLLGLVSLLVSYEISLDPGTGGSYHPRALSSATDTLDYNLYVDTARTEIWGDGTDDTATVTDSYTLGVLTVTRYYPVYGRVFADQNVAAGVYDDTITAT
>Q12FX3_POLSJ/50194
TWGVLLAAGTAHATISCSVSGNGFTSVYDPISTVPNDNVSSVTINCSRASGDPTTTTYSLASTNGLYPQGQNNRAYYPTNKYLKYDIYKDAAYSSRWGPGGSAPFTGTLNFGSGTSASLTLPYYNRVAAQQSAVAADYTDTMTAT
>A1VIJ0_POLNA/19170
ALFLLLATAGPAQAGSCTVGSSGLAFGAYQPLTFAGKLTSSAVTSNASISVVCTGIASGGAYSIALGPSTTGSGDRISTRYLGNSNGGDDMSFNIYTSASYSTVWGNGTTGGLVGGSIPVGDSNQSQPVYGRIAASQNTLRAGSYSGSLTMT
>Q8XVY0_RALSO/26164
TTTTFSVSTTVNATCVINSASALTFAAFDPSQGAQASTSSISVNCTNTTPFNIGLNAGTGTGATVASRVMTSGANTLTYSLYQDSGHASVWGNTVGTNTVAGTGAGMAAGNAITKTVYGLIPSQPNTVPGNYADTVTVT
>Q0BSH7_GRABC/37169
TTTTFQVTATVQASCIIQATNLSFGNYSGSQTDATSTIQVTCTNSTPYNVGLSAGTGSGATVSNRKMSLNSTSALPYALYSDASRSTNWGNTPNQDTVSGTGNGSAQSLTVYGRIQTGNYPTPGSYADTITAT
>Q0AAK3_ALKEH/24160
DTATFDVTATVDPTCTVDADNLVFGTYDPFSDTPLDENSEIRVQCTSDTPYDIGLDDGDNTGAEGERRMALADESDFLEYDLYHDNHGGTSWGDIDSGAELTGLSGTGSEQSYVVYGRIFAEQSVAVGNYVDTIEVT
>Q8XPY6_RALSO/36170
KTTTFTVSLTLQADCSISANALNFGTQGVLAANVDQTATLSVTCSNTAPYNVGFDAGTTTGSTIAARLLAGSGAATVGFQLYSDSARTQIWGNTVGTDTVSGTGSGTAQVLTVYGRVPSQNSPAAGTYSTTITAT
>Q63W79_BURPS/31169
ATATFTVSLTIQANCTISANALSFGTNGVLATAVNQQTTLSVTCSNTTSYNVGLDAGNVSGSTVSSRLLAGTTTGNTSTTVSFQLYQDSGHTTIWGNTVGTNTVSGTGNGTAQTLSVYGQVPAQTTPKPDTYESTVTAT
>Q7CVQ4_AGRFC/27162
ATTNFNVQITIQAACQINSAGNLDFGTNGVIGAPIDVTSQIVVQCTASTPFSLGLSAGAGSGATVANRLMTSAAGATISYSLYTTAAHSTVWGNTVGTDRQTGTGTGAPQNFTVFGRVPAQTTPAVGVYTDTVTAT
>Q985D5_RHILO/27162
ATGNMTVRITIQAECKVQTATDMDFGTNGVIDANVDQTSTISVQCTNSTPYNVGLSAGVGAGATVAVRKMTGPAAAVLNYSLYRDVARAQLWGTTIGTDTVAGTGNGAAQPLTVYGRVPPQTTPGAGVYTDTVAIT
>A6X8A6_OCHA4/27162
ATGNMNVRITIQAECKIVTATDLDFGTKGVIDVNVDQTSTISVQCTNGTPYTVGLSAGGGAGATVAMRKMTGAASATINYTIYRDAARTQVWGVTAGTDVVSGTGNGNAQSITAYGRVPAQTTPAPGVYSDVVSVT
>A9CH19_AGRFC/182313
TQVPFTVSAAVAPTCIISAQNINFGSHGVLNTAVDANGAINLTCTNGLNYSVALNGGLSNSPPAARQMVQGAASIIYGLYRDVSRTNVWGSAAGQIATGTGNGSLQTLTVFGRVPAQNTPAPGNYADTVVVT
>Q985D8_RHILO/205338
DRPTFTINAIVPANCLLAIQNIDFGSNGILGANVDATGGVSITCTPGTPYTVSLSNGTTGSAPTARKMSKGVETVTYGLYKDNARSQVWGDAAMPGSTVAGSGSGAAQNLTIYGRVPAQTTPSAGVYTDTVVVT
>A7H7Q6_ANADF/25150
ATAQFQVTATVVKKCKISATTIAFGNYDPATILSAEGTLTLKCTKGTLYSVALDGGSTGSRQMTQAAEVLDYELYSDAGHTAVWPSTAAAPSVAAAGADEALIIFAQVPADQYPAPGAYADTVTAT
>Q2IFL0_ANADE/27162
ATATLDVTATVVPSCTIAATPVAFGSYDPLVTNAATALDAQGTVTVTCTTGTAYTVGLGAGNSGSGSRAMQHASIAGAQLPYELYQEAARTTVWDSTVMQAGTAASITPVQYTVYGRIPAAQNVPTGNYADAVVAT
>Q0C623_HYPNA/23151
ANGTLDVQATVVNTCVVLTAPVVFASVGLDEVTANGSITVNCTNTSAFTVALDGGDSGDISARSLTHASLPASFNYQLYTDAGLTTVWGDGVTGSQANGSGPSQTLTVYGRTTSTPDTAGAYADEVQVT
>Q63W78_BURPS/193326
TFAFTASATVVNDCFINATNVAFGSTGVIQGALTATGTISAQCTNGDAFRIALNGGASGNVAARAMQRTGGGGAVNYQLYLDAAHSTIWGDGTAGTSTATGTGSGLSQSLTVYGQVPAQTTPAPGTYSDTITAT
>Q8XVY3_RALSO/23163
VLVALASWAPGALAVSCSVSANALSFGAYNTTSNLTGTTTVTITCGAWGGASSINYTLSASVGSGTYANRQVLNGSNVIAYNLYTTSADTSIWGDGNGDGTVTLSGTVTKQVGTVNLTIYGKINGGQNVVPGSYATTIPIT
>Q8XPY9_RALSO/25163
ASAQSCSVASASLNFGSISPVQAGNTDTSTTLTVSCSGFLLQGTVARACLNLGVGSGDTGISPRVLSAGANQLQYNLYADSARSVVWGGRTTPATPAIQVDVSLGLLGFGSATVTVYGRVPGGQTTVPAGAYTQSFSGT
>A9CH19_AGRFC/11158
IAAAFVASPVLAQSCTFSMSDMNFGFVNLAGGAAVDTTATLSVTCNNPLSLALSIRICPNINAGGGGQSGGIRRMLQGSNILNYQLYQTSARTTAWGSVTQPALGAPPPIDMALPLLINSTTRTVYGRINAGQASAARGLYLSSFAGG
>Q985D8_RHILO/37183
SAALLLPTVAWAQSCSFGVSAMNFGLVDTLSGSSSNSTATLSVNCTGLLLQRILVCPNLGTGSGGATASARQMLSGANDLNYQLYSDSARSVVWGSYAWPYPPTAPGFALTLNVLGSGSASQTIYGAILGGQATAVPSTYLSTFSGS
>Q3A2W0_PELCD/10150
IIVLLFAVDAYAFHCEVTTTPVSFGAYDVFSSFSLDTTGRISVSCNNPEKKRMPVTISISRGAANSFSPRQMRRIGGSDRMDYYLFVDASRTAVWGDGTGGSSTYVGMIDRTSPLNVPIYGRIPARQNLRAGSYQDILVVT
>A7H7Q5_ANADF/16150
APRAVDAAQPPSPGPSCSVSAGSVAFGAYDPLSPTHLDSTGTIGLTCAVRQLVTISLGTGQSGTFARELRGPGGAALRYDLYTDATRTQVWGDGTAGTATWPFETERGRYVPVYARVLAGQDVPAGPYSDTIVVT
>Q2IFK8_ANADE/19157
ATALSLVAPAAARAASCSLTMGTSIAFGAYDPLSPVPLTTTGMLQYRCSRGQPIRITFTAGSSGDVYARTLRQGPWTLAYNLYADAGFGTVWGDGTGGTAAAPAVTTLSNGLTVAYVFGRIPARQEPPVGPYSDTIVVT
>Q1D5L1_MYXXD/13153
AVAGVCGLLPGLAGAVCQIRSTIGVSFGTYLTTDLLPRDSAGSITYRCEGQITPITIDFSAGGSGTPLARSMAGPGAQRLEYNLYVDATRLIVWGNGTSGTGRYGPVVPLFGVEVTVPIFGRIPAGQAIPAGAYADTVVMT
>Q60C08_METCA/20167
LLACPKISDADPYQCDIGNISVPHAVYDPTDSNPNSSGVGTVGITCHLKNAKQTQQVQYTIALSRGSSGSYNPRRMSGGRGSLGYNLYLDAARVTIWGDGSGGTFPLRGTLLLNPTTPVQQVIHNIYGLIPPLQDVYAGTYTDTVTIT
>Q0AAK6_ALKEH/8153
SLFLVAAGSGSAQAYTCSISADPLAFGQYDPITGAQVDGASEVSVSCSLLGLVSLLVSYEISLDPGTGGSYHPRALSSATDTLDYNLYVDTARTEIWGDGTDDTATVTDSYTLGVLTVTRYYPVYGRVFADQNVAAGVYDDTITAT
>Q12FX3_POLSJ/50194
TWGVLLAAGTAHATISCSVSGNGFTSVYDPISTVPNDNVSSVTINCSRASGDPTTTTYSLASTNGLYPQGQNNRAYYPTNKYLKYDIYKDAAYSSRWGPGGSAPFTGTLNFGSGTSASLTLPYYNRVAAQQSAVAADYTDTMTAT
>A1VIJ0_POLNA/19170
ALFLLLATAGPAQAGSCTVGSSGLAFGAYQPLTFAGKLTSSAVTSNASISVVCTGIASGGAYSIALGPSTTGSGDRISTRYLGNSNGGDDMSFNIYTSASYSTVWGNGTTGGLVGGSIPVGDSNQSQPVYGRIAASQNTLRAGSYSGSLTMT
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