v3.3

Author: komstat

README.md

@@ -3,8 +3,8 @@
 ## 日本語
 
 * 生命情報・DDBJ センター
-* 公開日: 2025-01-16
-* version: v3.2
+* 公開日: 2025-02-27
+* version: v3.3
 
 [Bioinformation and DDBJ Center](https://www.ddbj.nig.ac.jp/index-e.html) のデータベースに登録するためのメタデータ XML を生成、チェックするツール。
 * [DDBJ Sequence Read Archive (DRA)](https://www.ddbj.nig.ac.jp/dra/submission.html): Submission、Experiment、Run と Analysis (任意) XML を生成・チェックするためのエクセルとスクリプト
@@ -13,6 +13,7 @@
 
 ## 履歴
 
+* 2025-02-27: v3.3 Organization bug fix
 * 2025-01-16: v3.2 TEL 削除
 * 2024-10-23: v3.1 Library Source SINGLE CELL
 * 2024-07-05: v3.0 シート名に DB prefix を付加
@@ -329,8 +330,8 @@ TBD
 ## English
 
 * Bioinformation and DDBJ Center
-* release: 2025-01-16
-* version: v3.2
+* release: 2025-02-27
+* version: v3.3
 
 These files are Excel, container images and tools for generation and validation of metadata XML files for databases of [Bioinformation and DDBJ Center](https://www.ddbj.nig.ac.jp/index-e.html).
 * [DDBJ Sequence Read Archive (DRA)](https://www.ddbj.nig.ac.jp/dra/submission-e.html): generate and check Submission, Experiment and Run XML files.
@@ -339,6 +340,7 @@ These files are Excel, container images and tools for generation and validation
 
 ## History
 
+* 2025-02-27: v3.3 Organization bug fix
 * 2025-01-16: v3.2 TEL removed
 * 2024-10-23: v3.1 Library Source SINGLE CELL
 * 2024-07-05: v3.0 DB prefix added to sheet name

exe/excel2xml_jga

@@ -153,7 +153,7 @@ for num, line in submission_a
     contact_a = Array.new
     pi_a = Array.new
     while submission_a[j][1][0] && /\d/ =~ submission_a[j][1][0].to_s && submission_a[j][1][3] # if there is a mail address
-
+						
       # PI
       if /Principal Investigator/ =~ submission_a[j][1][0].to_s
         # center name is fixed to Individual
@@ -793,8 +793,8 @@ study_f.puts xml_study.STUDY_SET{|study_set|
 
       # Extract PI information
       if submission_h["pi"]
-        for first_name, last_name, mail, tel, organization in submission_h["pi"]
-          # organization
+        for first_name, last_name, mail, organization in submission_h["pi"]
+					# organization
           study_attributes.STUDY_ATTRIBUTE{|study_attribute|
             study_attribute.TAG("Submitting organization")
             study_attribute.VALUE(organization)