modified

.github/workflows/code-quality.yml

@@ -0,0 +1,44 @@
+name: Code quality
+
+on: [push, pull_request]
+
+jobs:
+  build:
+    runs-on: ubuntu-latest
+
+    steps:
+    - name: Check out code
+      uses: actions/checkout@v3
+
+    - name: Set up Python
+      uses: actions/setup-python@v4
+      with:
+        python-version: '3.x'
+
+    - name: Install dependencies
+      run: |
+        python -m pip install --upgrade pip
+        pip install black pylint pytest coverage coveralls
+        pip install -r requirements/requirements.txt
+
+    - name: Run black
+      continue-on-error: true
+      run: black --check .
+
+    - name: Run lint with pylint
+      continue-on-error: true
+      run: |
+        find qDNA tools -type f -name "*.py" ! -name "__init__.py" | xargs pylint
+
+    - name: Run tests with pytest
+      run: python -m pytest
+
+    - name: Run tests with coverage
+      run: |
+        coverage run -m pytest
+
+    - name: Upload coverage to Coveralls
+      continue-on-error: true
+      env:
+        COVERALLS_REPO_TOKEN: ${{ secrets.COVERALLS_REPO_TOKEN }}
+      run: coveralls