Added documentation from II GDI Contentathon - #389
Open
svarona wants to merge 19 commits into
Open
Conversation
svarona
marked this pull request as ready for review
December 5, 2025 11:20
| * Information about pooled/multiplexed runs, including the instruments used, configurations used, whether processing was automated/manual, and demultiplexing. | ||
| * A description of how the instrument data was converted to standardised formats. | ||
| * The algorithms used in normalisation/alignment protocols. You should refer to [general best practice for sequencing projects](https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1008260). | ||
| * Collection protocol used. |
There was a problem hiding this comment.
This is duplicated, and I think there is a comment bit that is duplicated as well. Probably a pasting typo
| title: Pathogen characterisation | ||
| description: Finding (meta)data standards and documentation. | ||
| contributors: [Wolmar Nyberg Åkerström, Zahra Waheed, Liane Hughes, Flora D'Anna, Patricia Palagi, Wolfgang Maier, Diana Pilvar, Rafael Andrade Buono] | ||
| contributors: [Wolmar Nyberg Åkerström, Zahra Waheed, Liane Hughes, Flora D'Anna, Patricia Palagi, Wolfgang Maier, Diana Pilvar, Rafael Andrade Buono, Paula Mölling, Abeer Fadda, Dilza Campos, Aída moure Fernández, Andreas Scherer, Pau Pascual Mas, Paula Mölling, Abeer Fadda, Dilza Campos, Aída moure Fernández, Andreas Scherer, Pau Pascual Mas] |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Added documentation from II GDI Contentathon from GDI Task 7.3 contribution.
This PR updates the Markdown document:
data-description/human-clinical-and-health-data.mddata-description/pathogen-charcterisation.mddata-description/fair-data.mddata-sources/human-biomolecular-data.mddata-sources/pathogen-characterization.mdUsing the following documents as guide:
Data sources.docxData description.docx