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feat: Add DuckDB plugin #633
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100a36c
Add DuckDB plugin
andreahlert a161d0d
Rework DuckDB plugin: replace connector with TaskTemplate execute()
andreahlert 4e73d06
Add pandas and pyarrow as plugin dependencies
andreahlert 8ab159e
Fix empty query list and insert detection edge cases
andreahlert 39feca7
Add DDL-only query test, drop unnecessary None guard
andreahlert 270ff5c
Add flyte.io.DataFrame input test and fix execute() for wrapped DataF…
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,146 @@ | ||
| # DuckDB Plugin for Flyte | ||
|
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| Run DuckDB SQL queries as Flyte tasks with parameterized inputs, extension support, and DataFrame output. | ||
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| DuckDB is an embedded analytical database (like SQLite for OLAP). Queries execute locally and synchronously, so no remote credentials or connection setup is required. | ||
|
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| ## Installation | ||
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| ```bash | ||
| pip install flyteplugins-duckdb | ||
| ``` | ||
|
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| ## Quick start | ||
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| ```python | ||
| from flyteplugins.duckdb import DuckDB, DuckDBConfig | ||
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| import flyte | ||
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| config = DuckDBConfig() | ||
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| query = DuckDB( | ||
| name="count_rows", | ||
| query_template="SELECT COUNT(*) AS total FROM 'data.parquet'", | ||
| plugin_config=config, | ||
| output_dataframe_type=pd.DataFrame, | ||
| ) | ||
| ``` | ||
|
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| ## In-memory queries | ||
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| By default, DuckDB runs in-memory. This is ideal for ad-hoc analytics and querying files directly: | ||
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| ```python | ||
| config = DuckDBConfig() # defaults to database_path=":memory:" | ||
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| task = DuckDB( | ||
| name="analyze", | ||
| query_template="SELECT * FROM 'sales.parquet' WHERE amount > 100", | ||
| plugin_config=config, | ||
| output_dataframe_type=pd.DataFrame, | ||
| ) | ||
| ``` | ||
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| ## File-based databases | ||
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| To query a persistent DuckDB database file: | ||
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| ```python | ||
| config = DuckDBConfig(database_path="/data/analytics.duckdb") | ||
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| task = DuckDB( | ||
| name="query_db", | ||
| query_template="SELECT * FROM customers LIMIT 10", | ||
| plugin_config=config, | ||
| output_dataframe_type=pd.DataFrame, | ||
| ) | ||
| ``` | ||
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| ## Parameterized queries | ||
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| Use `%(name)s` placeholders and typed `inputs`: | ||
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| ```python | ||
| lookup = DuckDB( | ||
| name="lookup_user", | ||
| query_template="SELECT * FROM 'users.parquet' WHERE id = %(user_id)s", | ||
| plugin_config=config, | ||
| inputs={"user_id": int}, | ||
| output_dataframe_type=pd.DataFrame, | ||
| ) | ||
| ``` | ||
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| ## Extensions | ||
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| DuckDB supports extensions for additional functionality. Install and load them via `DuckDBConfig.extensions`: | ||
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| ```python | ||
| config = DuckDBConfig(extensions=["httpfs"]) | ||
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| task = DuckDB( | ||
| name="query_s3", | ||
| query_template="SELECT * FROM 's3://bucket/data.parquet' LIMIT 100", | ||
| plugin_config=config, | ||
| output_dataframe_type=pd.DataFrame, | ||
| ) | ||
| ``` | ||
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| Common extensions: | ||
| - `httpfs` - Read files from HTTP/S3 | ||
| - `spatial` - Geospatial functions | ||
| - `json` - JSON processing | ||
| - `excel` - Read Excel files | ||
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| ## Reading results as DataFrames | ||
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| Set `output_dataframe_type` to get query results as a pandas DataFrame: | ||
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| ```python | ||
| import pandas as pd | ||
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| select_task = DuckDB( | ||
| name="get_data", | ||
| query_template="SELECT * FROM 'data.parquet'", | ||
| plugin_config=config, | ||
| output_dataframe_type=pd.DataFrame, | ||
| ) | ||
| ``` | ||
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| ## Full example | ||
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| ```python | ||
| import pandas as pd | ||
| from flyteplugins.duckdb import DuckDB, DuckDBConfig | ||
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| import flyte | ||
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| config = DuckDBConfig(extensions=["httpfs"]) | ||
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| analyze_task = DuckDB( | ||
| name="analyze_sales", | ||
| query_template="SELECT region, SUM(amount) as total FROM 'sales.parquet' GROUP BY region", | ||
| plugin_config=config, | ||
| output_dataframe_type=pd.DataFrame, | ||
| ) | ||
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| duckdb_env = flyte.TaskEnvironment.from_task("duckdb_env", analyze_task) | ||
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| env = flyte.TaskEnvironment( | ||
| name="example_env", | ||
| image=flyte.Image.from_debian_base().with_pip_packages("flyteplugins-duckdb"), | ||
| depends_on=[duckdb_env], | ||
| ) | ||
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| @env.task | ||
| async def main() -> float: | ||
| df = await analyze_task() | ||
| return df["total"].sum().item() | ||
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| if __name__ == "__main__": | ||
| flyte.init_from_config() | ||
| run = flyte.with_runcontext(mode="remote").run(main) | ||
| print(run.url) | ||
| ``` |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,73 @@ | ||
| [project] | ||
| name = "flyteplugins-duckdb" | ||
| dynamic = ["version"] | ||
| description = "DuckDB plugin for flyte" | ||
| readme = "README.md" | ||
| authors = [{ name = "Andre Ahlert", email = "andreahlert@users.noreply.github.com" }] | ||
| requires-python = ">=3.10" | ||
| dependencies = [ | ||
| "flyte[connector]", | ||
| "duckdb", | ||
| ] | ||
|
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| [project.entry-points."flyte.connectors"] | ||
| duckdb = "flyteplugins.duckdb.connector:DuckDBConnector" | ||
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| [build-system] | ||
| requires = ["setuptools", "setuptools_scm"] | ||
| build-backend = "setuptools.build_meta" | ||
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| [tool.setuptools] | ||
| include-package-data = true | ||
| license-files = ["licenses/*.txt", "LICENSE"] | ||
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| [tool.setuptools.packages.find] | ||
| where = ["src"] | ||
| include = ["flyteplugins*"] | ||
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| [tool.setuptools_scm] | ||
| root = "../../" | ||
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| [tool.pytest.ini_options] | ||
| norecursedirs = [] | ||
| log_cli = true | ||
| log_cli_level = 20 | ||
| markers = [] | ||
| asyncio_default_fixture_loop_scope = "function" | ||
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| [tool.coverage.run] | ||
| branch = true | ||
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| [tool.ruff] | ||
| line-length = 120 | ||
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| [tool.ruff.lint] | ||
| select = [ | ||
| "E", | ||
| "W", | ||
| "F", | ||
| "I", | ||
| "PLW", | ||
| "YTT", | ||
| "ASYNC", | ||
| "C4", | ||
| "T10", | ||
| "EXE", | ||
| "ISC", | ||
| "LOG", | ||
| "PIE", | ||
| "Q", | ||
| "RSE", | ||
| "FLY", | ||
| "PGH", | ||
| "PLC", | ||
| "PLE", | ||
| "PLW", | ||
| "FURB", | ||
| "RUF", | ||
| ] | ||
| ignore = ["PGH003", "PLC0415"] | ||
|
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| [tool.ruff.lint.per-file-ignores] | ||
| "examples/*" = ["E402"] | ||
| "tests/*" = ["ASYNC230", "ASYNC240"] |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,52 @@ | ||
| """ | ||
| Key features: | ||
|
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| - Run SQL queries against DuckDB (in-memory or file-based) | ||
| - Parameterized SQL queries with typed inputs | ||
| - Query Parquet, CSV, and JSON files directly | ||
| - Load DuckDB extensions (httpfs, spatial, etc.) | ||
| - Returns query results as DataFrames | ||
|
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| Basic usage example: | ||
| ```python | ||
| import flyte | ||
| from flyte.io import DataFrame | ||
| from flyteplugins.duckdb import DuckDB, DuckDBConfig | ||
|
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| config = DuckDBConfig() | ||
|
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| count_rows = DuckDB( | ||
| name="count_rows", | ||
| query_template="SELECT COUNT(*) AS total FROM 'data.parquet'", | ||
| plugin_config=config, | ||
| output_dataframe_type=DataFrame, | ||
| ) | ||
|
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| flyte.TaskEnvironment.from_task("duckdb_env", count_rows) | ||
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| if __name__ == "__main__": | ||
| flyte.init_from_config() | ||
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| # Run locally (connector runs in-process) | ||
| run = flyte.with_runcontext(mode="local").run(count_rows) | ||
|
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| # Run remotely (connector runs on the control plane) | ||
| run = flyte.with_runcontext(mode="remote").run(count_rows) | ||
|
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| print(run.url) | ||
| ``` | ||
| """ | ||
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| from flyte.io._dataframe.dataframe import DataFrameTransformerEngine | ||
|
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| from flyteplugins.duckdb.connector import DuckDBConnector | ||
| from flyteplugins.duckdb.dataframe import ( | ||
| DuckDBToPandasDecodingHandler, | ||
| PandasToDuckDBEncodingHandler, | ||
| ) | ||
| from flyteplugins.duckdb.task import DuckDB, DuckDBConfig | ||
|
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| DataFrameTransformerEngine.register(PandasToDuckDBEncodingHandler()) | ||
| DataFrameTransformerEngine.register(DuckDBToPandasDecodingHandler()) | ||
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| __all__ = ["DuckDB", "DuckDBConfig", "DuckDBConnector"] | ||
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