Create setup.cfg

setup.cfg

@@ -0,0 +1,63 @@
+[metadata]
+name = trifid
+description = Machine Learning-based tool to assess the functional relevance of splice isoforms
+url = https://github.com/fpozoc/trifid
+long_description = file: README.md
+author = Fernando Pozo
+author_email = [email protected]
+keywords = python
+license = GNU General Public License v3.0
+classifiers =
+    Programming Language :: Python :: 3
+
+[options]
+zip_safe = True
+include_package_data = True
+packages=find:
+install_requires =
+    # Add project specific dependencies
+    # Stuff easy to break with updates
+
+    # Stable stuff usually backward compatible
+    click
+    coverage
+    loguru
+    python-dotenv
+    pre-commit
+    gh
+
+[options.package_data]
+* = *.txt, *.md
+config =  ['config/config.yaml']
+features = ['config/features.yaml']
+
+[options.extras_require]
+docs =
+    mkdocs
+    mkdocs-material
+    mike
+
+test =
+    pytest
+    pytest-cov
+
+dev =
+    black
+    pylint
+    isort
+    mypy
+    %(test)s
+    %(docs)s
+
+extra =
+    matplotlib
+    altair
+    altair_saver
+    eli5'
+    shap'
+    mlxtend'
+    rfpimp
+
+interactive =
+    jupyterlab
+    watermark