Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

[WIP] ngio refactor #31

Draft
wants to merge 8 commits into
base: main
Choose a base branch
from
Draft

[WIP] ngio refactor #31

wants to merge 8 commits into from

Conversation

jluethi
Copy link
Contributor

@jluethi jluethi commented Jan 31, 2025

Refactor the plugin to use ngio instead of the custom OMEZarrImage class.

This is WIP, see FIXMEs added. Also, it should be able to drop the fractal-tasks-core dependency. Only tricky part will be the well metadata loading.

This will need to be thoroughly tested. One new restriction it introduces: It can now only load correctly typed ROI & feature tables. The old version was tolerant to e.g. untyped tables if they contained the right content, the ngio version won't be anymore.

@jluethi
Copy link
Contributor Author

jluethi commented Jan 31, 2025

It will also drop Python 3.9 support

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant