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Bump the python-minor-and-patch group with 4 updates - #20

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Bump the python-minor-and-patch group with 4 updates#20
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Bumps the python-minor-and-patch group with 4 updates: numpy, scipy, ruff and scipy-stubs.

Updates numpy from 2.4.6 to 2.5.2

Release notes

Sourced from numpy's releases.

v2.5.2 (Aug 9, 2026)

NumPy 2.5.2 Release Notes

The NumPy 2.5.2 is a patch release that fixes bugs discovered after the 2.5.1 release. The big news is that it includes wheels for the newly released Python 3.15.0rc1.

This release supports Python versions 3.12-3.15

C API changes

PyArray_StringDTypeObject is opaque under the abi3t stable ABI

The PyArray_StringDTypeObject was accidentally exposed in NumPy 2.5 when targeting the free-threading-compatible stable ABI (Py_TARGET_ABI3T). PyArray_StringDTypeObject is now an opaque struct: extensions compiled that way cannot access its fields, since the struct layout depends on the size of the object header. Any code that accessed PyArray_StringDTypeObject fields in an abi3t build would have crashed, so we are making this API change in a bugfix release.

The NpyString allocator API remains usable by passing the descriptor object pointer, e.g. NpyString_acquire_allocator((PyArray_StringDTypeObject *)descr).

(gh-31771)

Contributors

A total of 16 people contributed to this release. People with a "+" by their names contributed a patch for the first time.

  • Abhijeetsingh Meena +
  • Charalampos Stratakis
  • Charles Harris
  • Chris Ninham +
  • David Woods
  • Geonho +
  • Gopu Yeshwanth Reddy +
  • Iason Krommydas
  • Ijtihed Kilani
  • Jelle Zijlstra +
  • Joren Hammudoglu
  • Kumar Aditya
  • Mike Boyle
  • Nathan Goldbaum
  • Raghuveer Devulapalli
  • Sebastian Berg

... (truncated)

Commits
  • 48fecee REL: Prepare for the NumPy 2.5.2 release (#32226)
  • ecf599c Merge pull request #32221 from charris/backport-32151
  • 3c7ac97 Merge pull request #32220 from charris/backport-32205
  • 23b30f4 BUG: avoid segfaults when legacy copyswap slot is not defined (#32151)
  • 4964ca8 TYP: isclose shape-typing fix for 2d array-likes (#32205)
  • c37ed94 MAINT: Skip limited_api tests on some platforms. (#32214)
  • 5cfd73b Merge pull request #32206 from charris/update-cibuildwheel
  • d8262bc MAINT: Update cibuildwheel to v4.2.0
  • 988d94d Merge pull request #32158 from charris/backport-32133
  • b2e4f97 BUG: avoid possible stack overflow in arraydescr_dealloc (#32133)
  • Additional commits viewable in compare view

Updates scipy from 1.17.1 to 1.18.0

Release notes

Sourced from scipy's releases.

SciPy 1.18.0 Release Notes

SciPy 1.18.0 is the culmination of 6 months of hard work. It contains many new features, numerous bug-fixes, improved test coverage and better documentation. There have been a number of deprecations and API changes in this release, which are documented below. All users are encouraged to upgrade to this release, as there are a large number of bug-fixes and optimizations. Before upgrading, we recommend that users check that their own code does not use deprecated SciPy functionality (to do so, run your code with python -Wd and check for DeprecationWarning s). Our development attention will now shift to bug-fix releases on the 1.18.x branch, and on adding new features on the main branch.

This release requires Python 3.12-3.14 and NumPy 2.0.0 or greater.

Highlights of this release

  • SciPy now supports three different build modes for BLAS and LAPACK LP64/ILP64 support, and machinery is provided for downstream cython_lapack consumers to gracefully handle LP64/ILP64 backend builds. ILP64 support has been substantially improved across the SciPy library.
  • Remaining Fortran to C translations have been completed---an experimental Fortran-free build option is now available to developers for testing purposes. Developer feedback is welcome on Fortran-free builds.
  • scipy.signal.whittaker_henderson now provides access to Whittaker-Henderson smoothing of a discrete signal.
  • A large number of scipy.stats functions now support lazy arrays and JAX JIT. Array API support has been improved substantially in SciPy, with at least 21 functions gaining new support in this release. 16 scipy.stats functions have also gained support for MArray input.

New features

scipy.fft improvements

  • SciPy's internal FFT backend has switched from pocketfft to its successor package ducc0.fft, which features several incremental improvements. The most significant of those from SciPy's perspective is probably that storage requirements for internally cached plans have been significantly reduced for most long 1D transforms. Plans that require more storage than 1MB will no longer be cached; this mainly affects huge 1D transforms of prime and near-prime sizes.

scipy.interpolate improvements

... (truncated)

Commits
  • 54ef542 REL: 1.18.0 release commit
  • a45e463 Merge pull request #25395 from tylerjereddy/treddy_prep_1.18.0_final
  • ee2442e TYP, MAINT, TST: PR 25395 revisions
  • 3225154 DOC: PR 25395 revisions
  • 14c7bd7 TYP: Fix mypy errors with pytest==9.1.0 (#25410)
  • 71522e9 DOC: revise SciPy 1.18.0 release notes
  • 92f8482 MAINT: fix errors from pytest 9.1 (#25378)
  • 7b27bf4 TST, MAINT: modernize spatial tests for pytest 10 (#25376)
  • d05b640 Merge pull request #25347 from tylerjereddy/treddy_version_bump_1.18.0rc3
  • e60fe8b REL: set to 1.18.0rc3 unreleased
  • Additional commits viewable in compare view

Updates ruff from 0.16.2 to 0.16.3

Release notes

Sourced from ruff's releases.

0.16.3

Release Notes

Released on 2026-08-13.

Preview features

  • [pylint] Fix false negatives on negative numbers (PLR6104) (#27251)
  • [pyupgrade] Add rule to replace while 1 with while True (UP048) (#27190)

Bug fixes

  • [flake8-bandit] Also check keyword arguments (S602, S603, S607, S609) (#27687)
  • [pylint] Allow continue in finally on Python 3.8 (#27626)
  • [pylint] Fix PLE1307 false positive with bools (#27651)
  • [pylint] Fix false positives and negatives with %b format character (PLE1300, PLE1307) (#27560)
  • [pylint] Improve handling of concatenated strings (PLE1300) (#27659)

Rule changes

  • [numpy] Make np.chararray autofix backwards-compatible (NPY201) (#27527)

Performance

  • Enable PGO for Linux x86-64 Ruff releases (#27570)
  • Enable PGO for Linux ARM64 Ruff releases (#27574)
  • Enable PGO for Windows x86-64 Ruff releases (#27573)
  • Enable PGO for macOS ARM64 Ruff releases (#27572)
  • Reduce Expr size to 64 bytes (#27591)

CLI

  • Hyperlink rule codes in ruff check --statistics output (#27646)

Documentation

  • [ruff] Also suggest asyncio.TaskGroup (RUF006) (#27461)

Other changes

Contributors

... (truncated)

Changelog

Sourced from ruff's changelog.

0.16.3

Released on 2026-08-13.

Preview features

  • [pylint] Fix false negatives on negative numbers (PLR6104) (#27251)
  • [pyupgrade] Add rule to replace while 1 with while True (UP048) (#27190)

Bug fixes

  • [flake8-bandit] Also check keyword arguments (S602, S603, S607, S609) (#27687)
  • [pylint] Allow continue in finally on Python 3.8 (#27626)
  • [pylint] Fix PLE1307 false positive with bools (#27651)
  • [pylint] Fix false positives and negatives with %b format character (PLE1300, PLE1307) (#27560)
  • [pylint] Improve handling of concatenated strings (PLE1300) (#27659)

Rule changes

  • [numpy] Make np.chararray autofix backwards-compatible (NPY201) (#27527)

Performance

  • Enable PGO for Linux x86-64 Ruff releases (#27570)
  • Enable PGO for Linux ARM64 Ruff releases (#27574)
  • Enable PGO for Windows x86-64 Ruff releases (#27573)
  • Enable PGO for macOS ARM64 Ruff releases (#27572)
  • Reduce Expr size to 64 bytes (#27591)

CLI

  • Hyperlink rule codes in ruff check --statistics output (#27646)

Documentation

  • [ruff] Also suggest asyncio.TaskGroup (RUF006) (#27461)

Other changes

Contributors

... (truncated)

Commits
  • b0e4702 Bump 0.16.3 (#27723)
  • ecdd401 [ty] Separate script and uv modules from project metadata (#27720)
  • 1263524 [ty] Simplify display implementations with std::fmt::from_fn (#27718)
  • 59196ba [ty] Unify polarity-aware relation construction (#27707)
  • b8c5e73 [ty] Disable CodSpeed cycle estimation for instrumented benchmarks (#27706)
  • 2b0d210 [ty] Centralize matched argument relations (#27705)
  • a9130f3 [pyupgrade] Add rule to replace while 1 with while True (while-one, `...
  • c64c7d6 [ty] Model try exception flow with operation checkpoints (#27471)
  • 9dea5ef [ty] Avoid deriving sequents for typevars with concrete bounds (#27587)
  • 9798e88 [ty] Preserve enum exhaustiveness with custom missing methods (#27700)
  • Additional commits viewable in compare view

Updates scipy-stubs from 1.17.1.5 to 1.18.1.0

Release notes

Sourced from scipy-stubs's releases.

v1.18.1.0

This scipy-stubs release comes with many improvements and even more fixes. It targets SciPy 1.18.1 and supports Python 3.12–3.15, NumPy 2.0–2.7, and optype 0.15–0.19.

🏆 Release Highlights

  • ✨ 105 improvements
  • 🐛 129 fixes
  • ✅ 100% test coverage
  • 🏷️ linalg.blas & linalg.lapack complete type coverage

What's Changed

⏬ SciPy Changes

✨ Improvements

... (truncated)

Commits
  • 844c24a 🔖 scipy-stubs 1.18.1.0
  • 6d3c811 Merge pull request #2302 from scipy:remove-update_dprint-workflow
  • fb4c765 ⚰️ remove broken update_dprint workflow
  • 19b2cb9 Merge pull request #2301 from scipy/bump-dev-deps
  • 7fbe7a2 ⬆️ update development dependencies
  • bd8ad95 Merge pull request #2300 from scipy:scipy-1.18.1
  • 52ce801 👽️ version: update version literals
  • 93cf36f 👽️ interpolate: update __class_getitem__ classmethods
  • c7cf199 📌 SciPy 1.18.1
  • 968e187 Merge pull request #2299 from scipy:stats.linregress/propagate-f32
  • Additional commits viewable in compare view

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@dependabot
Bump the python-minor-and-patch group with 4 updates
aaa769e 
Bumps the python-minor-and-patch group with 4 updates: [numpy](https://github.com/numpy/numpy), [scipy](https://github.com/scipy/scipy), [ruff](https://github.com/astral-sh/ruff) and [scipy-stubs](https://github.com/scipy/scipy-stubs).


Updates `numpy` from 2.4.6 to 2.5.2
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/RELEASE_WALKTHROUGH.rst)
- [Commits](numpy/numpy@v2.4.6...v2.5.2)

Updates `scipy` from 1.17.1 to 1.18.0
- [Release notes](https://github.com/scipy/scipy/releases)
- [Commits](scipy/scipy@v1.17.1...v1.18.0)

Updates `ruff` from 0.16.2 to 0.16.3
- [Release notes](https://github.com/astral-sh/ruff/releases)
- [Changelog](https://github.com/astral-sh/ruff/blob/main/CHANGELOG.md)
- [Commits](astral-sh/ruff@0.16.2...0.16.3)

Updates `scipy-stubs` from 1.17.1.5 to 1.18.1.0
- [Release notes](https://github.com/scipy/scipy-stubs/releases)
- [Commits](scipy/scipy-stubs@v1.17.1.5...v1.18.1.0)

---
updated-dependencies:
- dependency-name: numpy
  dependency-version: 2.5.2
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: python-minor-and-patch
- dependency-name: scipy
  dependency-version: 1.18.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: python-minor-and-patch
- dependency-name: ruff
  dependency-version: 0.16.3
  dependency-type: direct:development
  update-type: version-update:semver-patch
  dependency-group: python-minor-and-patch
- dependency-name: scipy-stubs
  dependency-version: 1.18.1.0
  dependency-type: direct:development
  update-type: version-update:semver-minor
  dependency-group: python-minor-and-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot dependabot Bot added dependencies Pull requests that update a dependency file python:uv Pull requests that update python:uv code labels Aug 24, 2026
@github-actions
github-actions Bot merged commit 584ff33 into main Aug 24, 2026
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@github-actions
github-actions Bot deleted the dependabot/uv/python-minor-and-patch-fc3f34c45e branch August 24, 2026 16:06
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