v2.0.2

[2.0.2] - 2025-02-21

Added

• Added H-optimus-0 model for H&E patches embeddings @stergioc (#208)
• Can provide qv_threshold argument to the Xenium reader to filter low-quality transcripts @callum-jpg (#210)

Changed

• Storing patches embeddings as an AnnData object instead of images (#212) (see updated tuto)

Fixed

• Right sorting scales for WSI reader with openslide backend @stergioc (#209)
• When a polygon cannot be simplified (for the Xenium Explorer), convert it to a circle (#206)
• sopa explorer write: use correct default argument for table_key in the CLI (#211)
• Fix Baysor usage on Windows (#185)
• Fix tight patches returning a different number of patches (#214)