Add MONDO terms#70
Open
cthoyt wants to merge 3 commits into
Open
Conversation
Member
|
Thanks! This looks straightforward, but underneath the hood, I am worried that we are introducing a lot of redundancies between MONDO and other namespaces providing entries for diseases. Unless these are explicitly resolved during term generation, we will end up with suboptimal results. |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Closes #50
This PR adds MONDO using the same interface as for EFO, HP, and other OBO ontologies following the inclusion of the MONDO resource in INDRA in gyorilab/indra#1311.
This PR also bumps the version from 0.7.1 to 0.7.2