Add special calling for pseudogenes e.g. for STRC

[marc-sturm]

• test DRAGEN 4.4 targeted/MRJD
  • also produced by DRAGEN 4.4l on NSX+?
• test ParaScope -> not working on positive controls

[marc-sturm]

Path: /mnt/storage5/users/ahsturm1/scripts/2026_07_09_missing_calls_STRC/

[leonschuetz]

• create combined gene list
  • gene list from mails
  • Dragen targeted caller, MRJD caller
• map sequences
  • extract 100bp reads with 5bp overlap (x10) and map to ref
  • check for MAPQ0 reads