QGGA masters project
Instructions on how to run each script are included within the scripts, beginning with master_download.sh. An overview of the structure and outputs of the pipeline can be seen at: https://github.com/jrsykes/msc_project_sex_antag/blob/master/scripts/transcriptome%20assembly%20and%20mapping%20pipeline.png
An overview of the full analysis for which this pipeline was origonally writen can be seen at: https://github.com/jrsykes/msc_project_sex_antag/blob/master/scripts/Methods_flowchart.png
