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1 change: 0 additions & 1 deletion database/build_taxids_index.py
Original file line number Diff line number Diff line change
@@ -1,5 +1,4 @@
import json
import time
import argparse

def run(args):
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2 changes: 0 additions & 2 deletions src/DatabaseReduction.py
Original file line number Diff line number Diff line change
@@ -1,9 +1,7 @@
import argparse
import sys
import subprocess
import logging
import json
from pathlib import Path

CLEAN_THRESHOLD = {'less-strict':0.9,'strict':0.99, 'very-strict':0.999}
MIN_CONTIG_LEN = 1000
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1 change: 0 additions & 1 deletion src/ReadClassification.py
Original file line number Diff line number Diff line change
@@ -1,7 +1,6 @@
import argparse
import logging
import json
from pathlib import Path
import random
import numpy as np
from sklearn.cluster import DBSCAN
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