-
Notifications
You must be signed in to change notification settings - Fork 5
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
udpate metadata (remove .rda extension)
- Loading branch information
Showing
1 changed file
with
15 additions
and
15 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,16 +1,16 @@ | ||
| "Title","Description","BiocVersion","Genome","SourceType","SourceUrl","SourceVersion","Species","TaxonomyId","Coordinate_1_based","DataProvider","Maintainer","RDataClass","DispatchClass","RDataPath","Tags" | ||
| "hpaCancer16.1.rda","Pathology data: Staining profiles for proteins in human tumor tissue (version 16.1).","3.16","","TSV","https://www.proteinatlas.org/download","16.1","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/hpaCancer16.1.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" | ||
| "hpaCancer.rda","Pathology data: Staining profiles for proteins in human tumor tissue.","3.16","","TSV","https://www.proteinatlas.org/download","21.0","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/hpaCancer.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" | ||
| "hpaNormalTissue16.1.rda","Normal tissue data: Expression profiles for proteins in human tissues based on immunohistochemisty using tissue micro arrays (version 16.1)","3.16","","TSV","https://www.proteinatlas.org/download","16.1","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/hpaNormalTissue16.1.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" | ||
| "hpaNormalTissue.rda","Normal tissue data: Expression profiles for proteins in human tissues based on immunohistochemisty using tissue micro arrays.","3.16","","TSV","https://www.proteinatlas.org/download","21.0","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/hpaNormalTissue.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" | ||
| "hpaSecretome.rda","Secretome data: Ensembl genes with at least one predicted secreted transcript according to HPA predictions.","3.16","","TSV","https://www.proteinatlas.org/download","21.0","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/hpaSecretome.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" | ||
| "hpaSubcellularLoc14.rda","Subcellular location data: Subcellular location of proteins based on immunofluorescently stained cells (version 14).","3.16","","TSV","https://www.proteinatlas.org/download","14.0","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/hpaSubcellularLoc14.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" | ||
| "hpaSubcellularLoc16.1.rda","Subcellular location data: Subcellular location of proteins based on immunofluorescently stained cells (version 16.1).","3.16","","TSV","https://www.proteinatlas.org/download","16.1","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/hpaSubcellularLoc16.1.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" | ||
| "hpaSubcellularLoc.rda","Subcellular location of proteins based on immunofluorescently stained cells.","3.16","","TSV","https://www.proteinatlas.org/download","21.0","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/hpaSubcellularLoc.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" | ||
| "rnaConsensusTissue.rda","RNA consensus tissue gene data: Consensus transcript expression levels summarized per gene in 54 tissues based on transcriptomics data from HPA and GTEx.","3.16","","TSV","https://www.proteinatlas.org/download","21.0","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/rnaConsensusTissue.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" | ||
| "rnaFantomTissue.rda","RNA FANTOM tissue gene data: Transcript expression levels summarized per gene in 60 tissues based on CAGE data","3.16","","TSV","https://www.proteinatlas.org/download","21.0","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/rnaFantomTissue.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" | ||
| "rnaGeneCellLine16.1.rda","RNA HPA cell line gene data: Transcript expression levels summarized per gene in 69 cell lines (version 16.1).","3.16","","TSV","https://www.proteinatlas.org/download","16.1","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/rnaGeneCellLine16.1.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" | ||
| "rnaGeneCellLine.rda","RNA HPA cell line gene data: Transcript expression levels summarized per gene in 69 cell lines.","3.16","","TSV","https://www.proteinatlas.org/download","21.0","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/rnaGeneCellLine.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" | ||
| "rnaGeneTissue21.0.rda","RNA HPA tissue gene data: Transcript expression levels summarized per gene in 37 tissues based on RNA-seq (version 21.0)","3.16","","TSV","https://www.proteinatlas.org/download","21.0","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/rnaGeneTissue21.0.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" | ||
| "rnaGtexTissue.rda","RNA GTEx tissue gene data: Transcript expression levels summarized per gene in 37 tissues based on RNA-seq","3.16","","TSV","https://www.proteinatlas.org/download","21.0","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/rnaGtexTissue.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" | ||
| "rnaHpaTissue.rda","RNA HPA tissue gene data: Transcript expression levels summarized per gene in 256 tissues based on RNA-seq.","3.16","","TSV","https://www.proteinatlas.org/download","21.0","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/rnaHpaTissue.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" | ||
| "hpaCancer16.1","Pathology data: Staining profiles for proteins in human tumor tissue (version 16.1).","3.16","","TSV","https://www.proteinatlas.org/download","16.1","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/hpaCancer16.1.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" | ||
| "hpaCancer","Pathology data: Staining profiles for proteins in human tumor tissue.","3.16","","TSV","https://www.proteinatlas.org/download","21.0","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/hpaCancer.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" | ||
| "hpaNormalTissue16.1","Normal tissue data: Expression profiles for proteins in human tissues based on immunohistochemisty using tissue micro arrays (version 16.1)","3.16","","TSV","https://www.proteinatlas.org/download","16.1","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/hpaNormalTissue16.1.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" | ||
| "hpaNormalTissue","Normal tissue data: Expression profiles for proteins in human tissues based on immunohistochemisty using tissue micro arrays.","3.16","","TSV","https://www.proteinatlas.org/download","21.0","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/hpaNormalTissue.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" | ||
| "hpaSecretome","Secretome data: Ensembl genes with at least one predicted secreted transcript according to HPA predictions.","3.16","","TSV","https://www.proteinatlas.org/download","21.0","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/hpaSecretome.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" | ||
| "hpaSubcellularLoc14","Subcellular location data: Subcellular location of proteins based on immunofluorescently stained cells (version 14).","3.16","","TSV","https://www.proteinatlas.org/download","14.0","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/hpaSubcellularLoc14.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" | ||
| "hpaSubcellularLoc16.1","Subcellular location data: Subcellular location of proteins based on immunofluorescently stained cells (version 16.1).","3.16","","TSV","https://www.proteinatlas.org/download","16.1","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/hpaSubcellularLoc16.1.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" | ||
| "hpaSubcellularLoc","Subcellular location of proteins based on immunofluorescently stained cells.","3.16","","TSV","https://www.proteinatlas.org/download","21.0","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/hpaSubcellularLoc.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" | ||
| "rnaConsensusTissue","RNA consensus tissue gene data: Consensus transcript expression levels summarized per gene in 54 tissues based on transcriptomics data from HPA and GTEx.","3.16","","TSV","https://www.proteinatlas.org/download","21.0","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/rnaConsensusTissue.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" | ||
| "rnaFantomTissue","RNA FANTOM tissue gene data: Transcript expression levels summarized per gene in 60 tissues based on CAGE data","3.16","","TSV","https://www.proteinatlas.org/download","21.0","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/rnaFantomTissue.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" | ||
| "rnaGeneCellLine16.1","RNA HPA cell line gene data: Transcript expression levels summarized per gene in 69 cell lines (version 16.1).","3.16","","TSV","https://www.proteinatlas.org/download","16.1","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/rnaGeneCellLine16.1.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" | ||
| "rnaGeneCellLine","RNA HPA cell line gene data: Transcript expression levels summarized per gene in 69 cell lines.","3.16","","TSV","https://www.proteinatlas.org/download","21.0","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/rnaGeneCellLine.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" | ||
| "rnaGeneTissue21.0","RNA HPA tissue gene data: Transcript expression levels summarized per gene in 37 tissues based on RNA-seq (version 21.0)","3.16","","TSV","https://www.proteinatlas.org/download","21.0","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/rnaGeneTissue21.0.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" | ||
| "rnaGtexTissue","RNA GTEx tissue gene data: Transcript expression levels summarized per gene in 37 tissues based on RNA-seq","3.16","","TSV","https://www.proteinatlas.org/download","21.0","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/rnaGtexTissue.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" | ||
| "rnaHpaTissue","RNA HPA tissue gene data: Transcript expression levels summarized per gene in 256 tissues based on RNA-seq.","3.16","","TSV","https://www.proteinatlas.org/download","21.0","Homo sapiens","9606","","Human Protein Atlas","Laurent Gatto <[email protected]>","data.frame","Rda","hpar/data/rnaHpaTissue.rda","ExperimentHub:ExperimentData:ReproducibleResearch:RepositoryData:CancerData:Homo_sapiens_Data:Proteome:Tissue" |