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Initial implementation of upscaling. Pipeline consists of
It has been kept largely separate from the restart.py work even thought there is potential redundancy (for instance computation of density is done here with a separate EOS).
This is a functional re-implementation of David Kamm's Dinostics OOP repo and bears little resemblance to his work. I decided to do this as the Dinostics package is overkill for upscaling / regridding.
TODOs before merge:
Set of instructions to reproduce entire pipeline.