Evolutionary analyses for Dawe et al., 2018, A Kinesin-14 Motor Activates Neocentromeres to Promote Meiotic Drive in Maize

Data and scripts included to:

1. assemble_tripsacum/ perform a local assembly of tripsacum kinesins

2. kinesin_tree/ build tree of related kinesins

3. positive_selection/ test for positive selection on kindr copies using BUSTED

4. kinesin_divergence_dating/ date origin of kindr array

5. identify_haplotypes/ characterize IBS regions and plot haplotypes