Skip to content
@mcvickerlab

McVicker Lab

Pinned Loading

  1. WASP2 WASP2 Public

    WASP2: High-performance allele-specific analysis pipeline for next-generation sequencing data

    Python 10 2

  2. GenVarLoader GenVarLoader Public

    Dataloader for applying sequence models to personalized genomics

    Python 29 5

Repositories

Showing 7 of 7 repositories
  • GenVarLoader Public

    Dataloader for applying sequence models to personalized genomics

    mcvickerlab/GenVarLoader's past year of commit activity
    Python 29 MIT 5 45 3 Updated Sep 15, 2026
  • WASP2 Public

    WASP2: High-performance allele-specific analysis pipeline for next-generation sequencing data

    mcvickerlab/WASP2's past year of commit activity
    Python 10 2 1 3 Updated Sep 1, 2026
  • genvarloader-cli Public

    Command line interface for GenVarLoader

    mcvickerlab/genvarloader-cli's past year of commit activity
    Python 0 0 0 0 Updated Mar 6, 2026
  • runaAI Public
    mcvickerlab/runaAI's past year of commit activity
    Dockerfile 0 0 0 0 Updated Jan 31, 2026
  • varCA Public

    Use an ensemble of variant callers to call variants from ATAC-seq data

    mcvickerlab/varCA's past year of commit activity
    Python 23 MIT 6 19 (2 issues need help) 1 Updated May 14, 2025
  • sn_cocaine_rats Public
    mcvickerlab/sn_cocaine_rats's past year of commit activity
    Python 2 MIT 0 0 0 Updated Jan 24, 2025
  • GLiMMIRS Public

    GLiMMIRS: Generalized Linear Models for Measuring Interactions between Regulatory Sequences

    mcvickerlab/GLiMMIRS's past year of commit activity
    Jupyter Notebook 7 MIT 1 0 1 Updated Aug 29, 2024

Most used topics

Loading…