feat: Add Public init using Kingfisher#736

Open

SilasK wants to merge 25 commits intomainfrom

Commits on Jul 29, 2024

Commits on Aug 15, 2024

Commits on Aug 16, 2024

public init works now need to update snakefiles
SilasK
committed

Commits on Aug 17, 2024

Commits on Sep 25, 2025

add docker file for testing
SilasK
committed
update minimap wrapper
SilasK
committed
limit mamba =1 #742
SilasK
committed
use mamba as it is default with snakemak =17
SilasK
committed
up to date fastx - not teste with genecatalog
SilasK
committed
up to data sambamba
SilasK
committed
Revert "update minimap wrapper"
SilasK
committed
WIP update packages
SilasK
committed
Update sambamba>=1.0.1

CedricMidoux
authored and
SilasK
committed
format and codespell

CedricMidoux
authored and
SilasK
committed
fix load_configfile
SilasK
committed
ask for snakemake 9.3.3

Silas Kieser
authored and
SilasK
committed
updated instrain

Silas Kieser
authored and
SilasK
committed