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Refine default resource config #104

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Refine default resource config

Refine default resource config #104

Triggered via push December 16, 2024 19:12
@lczechlczech
pushed 0a56b7b
master
Status Cancelled
Total duration 14m 48s
Artifacts 51

ci.yaml

on: push
Matrix: envs
Matrix: example
Matrix: test
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78 errors and 16 warnings
test (ubuntu-latest, hafpipe-4, mamba)
Process completed with exit code 1.
test (ubuntu-latest, mapping-bowtie2-1, mamba)
Process completed with exit code 1.
test (ubuntu-latest, mapping-bowtie2-2, mamba)
Process completed with exit code 1.
example (ubuntu-24.04)
The run was canceled by @lczech.
example (ubuntu-24.04)
The operation was canceled.
test (ubuntu-latest, trimming-none, mamba)
The run was canceled by @lczech.
test (ubuntu-latest, trimming-none, mamba)
The operation was canceled.
test (ubuntu-latest, duplicates-dedup-1, mamba)
The run was canceled by @lczech.
test (ubuntu-latest, duplicates-dedup-1, mamba)
The operation was canceled.
test (ubuntu-latest, calling-haplotypecaller-4, mamba)
The run was canceled by @lczech.
test (ubuntu-latest, calling-haplotypecaller-4, mamba)
The operation was canceled.
test (ubuntu-latest, calling-haplotypecaller-2, mamba)
The run was canceled by @lczech.
test (ubuntu-latest, calling-haplotypecaller-2, mamba)
The operation was canceled.
test (ubuntu-latest, trimming-seqprep-1, mamba)
The run was canceled by @lczech.
test (ubuntu-latest, trimming-seqprep-1, mamba)
The operation was canceled.
test (ubuntu-latest, trimming-seqprep-2, mamba)
The run was canceled by @lczech.
test (ubuntu-latest, trimming-seqprep-2, mamba)
The operation was canceled.
example (ubuntu-22.04)
The run was canceled by @lczech.
example (ubuntu-22.04)
The operation was canceled.
test (ubuntu-latest, duplicates-dedup-2, mamba)
The run was canceled by @lczech.
test (ubuntu-latest, duplicates-dedup-2, mamba)
The operation was canceled.
test (ubuntu-latest, download, mamba)
The run was canceled by @lczech.
test (ubuntu-latest, download, mamba)
The operation was canceled.
example (ubuntu-20.04)
The run was canceled by @lczech.
example (ubuntu-20.04)
The operation was canceled.
envs (macos-13, mamba)
The run was canceled by @lczech.
envs (macos-13, mamba)
The operation was canceled.
envs (macos-13, mamba)
ENOTEMPTY: directory not empty, rmdir '/Users/runner/micromamba/envs/grenepipe/envs/picard/bin'
test (ubuntu-latest, trimming-adapterremoval-2, mamba)
The run was canceled by @lczech.
test (ubuntu-latest, trimming-adapterremoval-2, mamba)
The operation was canceled.
test (ubuntu-latest, trimming-fastp-3, mamba)
The run was canceled by @lczech.
test (ubuntu-latest, trimming-fastp-3, mamba)
The operation was canceled.
test (ubuntu-latest, mapping-bwa-aln-1, mamba)
The run was canceled by @lczech.
test (ubuntu-latest, mapping-bwa-aln-1, mamba)
The operation was canceled.
test (ubuntu-latest, mapping-bwa-aln-4, mamba)
The run was canceled by @lczech.
test (ubuntu-latest, mapping-bwa-aln-4, mamba)
The operation was canceled.
test (ubuntu-latest, trimming-cutadapt-1, mamba)
The run was canceled by @lczech.
test (ubuntu-latest, trimming-cutadapt-1, mamba)
The operation was canceled.
test (ubuntu-latest, mapping-bwa-mem2-2, mamba)
The run was canceled by @lczech.
test (ubuntu-latest, mapping-bwa-mem2-2, mamba)
The operation was canceled.
test (ubuntu-latest, calling-haplotypecaller-1, mamba)
The run was canceled by @lczech.
test (ubuntu-latest, calling-haplotypecaller-1, mamba)
The operation was canceled.
test (ubuntu-latest, calling-haplotypecaller-3, mamba)
The run was canceled by @lczech.
test (ubuntu-latest, calling-haplotypecaller-3, mamba)
The operation was canceled.
test (ubuntu-latest, trimming-skewer-1, mamba)
The run was canceled by @lczech.
test (ubuntu-latest, trimming-skewer-1, mamba)
The operation was canceled.
test (ubuntu-latest, mapping-bwa-mem2-1, mamba)
The run was canceled by @lczech.
test (ubuntu-latest, mapping-bwa-mem2-1, mamba)
The operation was canceled.
test (ubuntu-latest, mapping-bwa-aln-2, mamba)
The run was canceled by @lczech.
test (ubuntu-latest, mapping-bwa-aln-2, mamba)
The operation was canceled.
test (ubuntu-latest, trimming-fastp-1, mamba)
The run was canceled by @lczech.
test (ubuntu-latest, trimming-fastp-1, mamba)
The operation was canceled.
test (ubuntu-latest, mapping-bwa-mem-1, mamba)
The run was canceled by @lczech.
test (ubuntu-latest, mapping-bwa-mem-1, mamba)
The operation was canceled.
test (ubuntu-24.04, base)
The run was canceled by @lczech.
test (ubuntu-24.04, base)
The operation was canceled.
test (ubuntu-latest, trimming-fastp-2, mamba)
The run was canceled by @lczech.
test (ubuntu-latest, trimming-fastp-2, mamba)
The operation was canceled.
test (ubuntu-latest, base, mamba)
The run was canceled by @lczech.
test (ubuntu-latest, base, mamba)
The operation was canceled.
test (ubuntu-latest, trimming-adapterremoval-3, mamba)
The run was canceled by @lczech.
test (ubuntu-latest, trimming-adapterremoval-3, mamba)
The operation was canceled.
test (ubuntu-latest, mapping-bwa-aln-3, mamba)
The run was canceled by @lczech.
test (ubuntu-latest, mapping-bwa-aln-3, mamba)
The operation was canceled.
test (ubuntu-22.04, base)
The run was canceled by @lczech.
test (ubuntu-22.04, base)
The operation was canceled.
test (ubuntu-20.04, base)
The run was canceled by @lczech.
test (ubuntu-20.04, base)
The operation was canceled.
test (ubuntu-latest, trimming-skewer-2, mamba)
The run was canceled by @lczech.
test (ubuntu-latest, trimming-skewer-2, mamba)
The operation was canceled.
test (ubuntu-latest, trimming-cutadapt-2, mamba)
The run was canceled by @lczech.
test (ubuntu-latest, trimming-cutadapt-2, mamba)
The operation was canceled.
example (macos-13)
The run was canceled by @lczech.
example (macos-13)
The operation was canceled.
test (macos-13, base)
The run was canceled by @lczech.
test (macos-13, base)
The operation was canceled.
envs (macos-13, micromamba)
The run was canceled by @lczech.
envs (macos-13, micromamba)
The operation was canceled.
test (ubuntu-latest, hafpipe-4, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, hafpipe-1, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, hafpipe-2, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, hafpipe-3, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, pileup-1, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, mapping-bowtie2-1, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, mapping-bowtie2-2, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, calling-bcftools-3, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, calling-bcftools-1, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, calling-bcftools-4, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, calling-bcftools-2, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, trimming-adapterremoval-1, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, calling-freebayes-3, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, mappings-table, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, calling-freebayes-1, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (ubuntu-latest, calling-freebayes-2, mamba)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636

Artifacts

Produced during runtime
Name Size
logs-example-macos-13
30.8 KB
logs-example-ubuntu-20.04
105 KB
logs-example-ubuntu-22.04
117 KB
logs-example-ubuntu-24.04
131 KB
logs-test-macos-13-base
22.2 KB
logs-test-ubuntu-20.04-base
103 KB
logs-test-ubuntu-22.04-base
99.7 KB
logs-test-ubuntu-24.04-base
107 KB
logs-test-ubuntu-latest-base
102 KB
logs-test-ubuntu-latest-calling-bcftools-1
91.7 KB
logs-test-ubuntu-latest-calling-bcftools-2
92.9 KB
logs-test-ubuntu-latest-calling-bcftools-3
104 KB
logs-test-ubuntu-latest-calling-bcftools-4
101 KB
logs-test-ubuntu-latest-calling-freebayes-1
96.9 KB
logs-test-ubuntu-latest-calling-freebayes-2
94.2 KB
logs-test-ubuntu-latest-calling-freebayes-3
96.1 KB
logs-test-ubuntu-latest-calling-haplotypecaller-1
136 KB
logs-test-ubuntu-latest-calling-haplotypecaller-2
139 KB
logs-test-ubuntu-latest-calling-haplotypecaller-3
147 KB
logs-test-ubuntu-latest-calling-haplotypecaller-4
165 KB
logs-test-ubuntu-latest-download
74.6 KB
logs-test-ubuntu-latest-duplicates-dedup-1
162 KB
logs-test-ubuntu-latest-duplicates-dedup-2
142 KB
logs-test-ubuntu-latest-hafpipe-1
76.8 KB
logs-test-ubuntu-latest-hafpipe-2
84.8 KB
logs-test-ubuntu-latest-hafpipe-3
84.9 KB
logs-test-ubuntu-latest-hafpipe-4
54.5 KB
logs-test-ubuntu-latest-mapping-bowtie2-1
41.6 KB
logs-test-ubuntu-latest-mapping-bowtie2-2
41.8 KB
logs-test-ubuntu-latest-mapping-bwa-aln-1
117 KB
logs-test-ubuntu-latest-mapping-bwa-aln-2
122 KB
logs-test-ubuntu-latest-mapping-bwa-aln-3
137 KB
logs-test-ubuntu-latest-mapping-bwa-aln-4
127 KB
logs-test-ubuntu-latest-mapping-bwa-mem-1
108 KB
logs-test-ubuntu-latest-mapping-bwa-mem2-1
110 KB
logs-test-ubuntu-latest-mapping-bwa-mem2-2
113 KB
logs-test-ubuntu-latest-mappings-table
142 KB
logs-test-ubuntu-latest-pileup-1
64.5 KB
logs-test-ubuntu-latest-trimming-adapterremoval-1
155 KB
logs-test-ubuntu-latest-trimming-adapterremoval-2
106 KB
logs-test-ubuntu-latest-trimming-adapterremoval-3
131 KB
logs-test-ubuntu-latest-trimming-cutadapt-1
109 KB
logs-test-ubuntu-latest-trimming-cutadapt-2
206 KB
logs-test-ubuntu-latest-trimming-fastp-1
164 KB
logs-test-ubuntu-latest-trimming-fastp-2
126 KB
logs-test-ubuntu-latest-trimming-fastp-3
126 KB
logs-test-ubuntu-latest-trimming-none
159 KB
logs-test-ubuntu-latest-trimming-seqprep-1
134 KB
logs-test-ubuntu-latest-trimming-seqprep-2
129 KB
logs-test-ubuntu-latest-trimming-skewer-1
132 KB
logs-test-ubuntu-latest-trimming-skewer-2
142 KB