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Fix done file requests #110

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Fix done file requests

Fix done file requests #110

Triggered via push February 11, 2025 12:20
@lczechlczech
pushed 2af215a
dev
Status Failure
Total duration 24m 8s
Artifacts 51

ci.yaml

on: push
Matrix: envs
Matrix: example
Matrix: test
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38 errors
test (ubuntu-latest, mapping-bwa-aln-3, mamba)
Process completed with exit code 1.
test (ubuntu-latest, mapping-bwa-aln-1, mamba)
Process completed with exit code 1.
test (ubuntu-latest, mapping-bwa-aln-2, mamba)
Process completed with exit code 1.
test (ubuntu-latest, mappings-table, mamba)
Process completed with exit code 1.
test (ubuntu-latest, mapping-bwa-aln-4, mamba)
Process completed with exit code 1.
test (ubuntu-latest, trimming-none, mamba)
Process completed with exit code 1.
test (ubuntu-latest, hafpipe-2, mamba)
Process completed with exit code 1.
test (ubuntu-latest, hafpipe-1, mamba)
Process completed with exit code 1.
test (ubuntu-latest, hafpipe-4, mamba)
Process completed with exit code 1.
test (ubuntu-latest, hafpipe-3, mamba)
Process completed with exit code 1.
test (ubuntu-latest, pileup-1, mamba)
Process completed with exit code 1.
test (ubuntu-latest, trimming-adapterremoval-1, mamba)
Process completed with exit code 1.
test (ubuntu-latest, calling-haplotypecaller-4, mamba)
Process completed with exit code 1.
test (ubuntu-latest, calling-freebayes-3, mamba)
Process completed with exit code 1.
test (ubuntu-latest, calling-freebayes-2, mamba)
Process completed with exit code 1.
test (ubuntu-latest, calling-haplotypecaller-3, mamba)
Process completed with exit code 1.
test (ubuntu-latest, calling-haplotypecaller-2, mamba)
Process completed with exit code 1.
test (ubuntu-latest, calling-bcftools-2, mamba)
Process completed with exit code 1.
test (ubuntu-latest, calling-bcftools-3, mamba)
Process completed with exit code 1.
test (ubuntu-latest, calling-haplotypecaller-1, mamba)
Process completed with exit code 1.
test (ubuntu-latest, calling-bcftools-4, mamba)
Process completed with exit code 1.
test (ubuntu-latest, calling-bcftools-1, mamba)
Process completed with exit code 1.
test (ubuntu-latest, calling-freebayes-1, mamba)
Process completed with exit code 1.
test (ubuntu-latest, trimming-seqprep-2, mamba)
Process completed with exit code 1.
test (ubuntu-latest, trimming-seqprep-1, mamba)
Process completed with exit code 1.
test (ubuntu-latest, trimming-fastp-3, mamba)
Process completed with exit code 1.
test (ubuntu-latest, trimming-fastp-1, mamba)
Process completed with exit code 1.
test (ubuntu-latest, trimming-skewer-1, mamba)
Process completed with exit code 1.
test (ubuntu-latest, trimming-skewer-2, mamba)
Process completed with exit code 1.
test (ubuntu-latest, trimming-cutadapt-1, mamba)
Process completed with exit code 1.
test (ubuntu-latest, trimming-fastp-2, mamba)
Process completed with exit code 1.
test (ubuntu-latest, trimming-adapterremoval-3, mamba)
Process completed with exit code 1.
test (ubuntu-latest, download, mamba)
Process completed with exit code 1.
test (ubuntu-24.04, base)
Process completed with exit code 1.
test (ubuntu-22.04, base)
Process completed with exit code 1.
test (ubuntu-20.04, base)
Process completed with exit code 1.
test (ubuntu-latest, base, mamba)
Process completed with exit code 1.
test (macos-13, base)
Process completed with exit code 1.

Artifacts

Produced during runtime
Name Size
logs-example-macos-13
44.9 KB
logs-example-ubuntu-20.04
44.7 KB
logs-example-ubuntu-22.04
44.8 KB
logs-example-ubuntu-24.04
44.6 KB
logs-test-macos-13-base
78 KB
logs-test-ubuntu-20.04-base
77.4 KB
logs-test-ubuntu-22.04-base
77.4 KB
logs-test-ubuntu-24.04-base
77.5 KB
logs-test-ubuntu-latest-base
77.4 KB
logs-test-ubuntu-latest-calling-bcftools-1
87.6 KB
logs-test-ubuntu-latest-calling-bcftools-2
75.5 KB
logs-test-ubuntu-latest-calling-bcftools-3
71.9 KB
logs-test-ubuntu-latest-calling-bcftools-4
75.3 KB
logs-test-ubuntu-latest-calling-freebayes-1
87.6 KB
logs-test-ubuntu-latest-calling-freebayes-2
71.8 KB
logs-test-ubuntu-latest-calling-freebayes-3
75.4 KB
logs-test-ubuntu-latest-calling-haplotypecaller-1
87.7 KB
logs-test-ubuntu-latest-calling-haplotypecaller-2
75.7 KB
logs-test-ubuntu-latest-calling-haplotypecaller-3
75.3 KB
logs-test-ubuntu-latest-calling-haplotypecaller-4
82.5 KB
logs-test-ubuntu-latest-download
76.4 KB
logs-test-ubuntu-latest-duplicates-dedup-1
162 KB
logs-test-ubuntu-latest-duplicates-dedup-2
162 KB
logs-test-ubuntu-latest-hafpipe-1
64.2 KB
logs-test-ubuntu-latest-hafpipe-2
71.3 KB
logs-test-ubuntu-latest-hafpipe-3
72.3 KB
logs-test-ubuntu-latest-hafpipe-4
69.5 KB
logs-test-ubuntu-latest-mapping-bowtie2-1
168 KB
logs-test-ubuntu-latest-mapping-bowtie2-2
178 KB
logs-test-ubuntu-latest-mapping-bwa-aln-1
20.8 KB
logs-test-ubuntu-latest-mapping-bwa-aln-2
20.8 KB
logs-test-ubuntu-latest-mapping-bwa-aln-3
20.8 KB
logs-test-ubuntu-latest-mapping-bwa-aln-4
20.8 KB
logs-test-ubuntu-latest-mapping-bwa-mem-1
169 KB
logs-test-ubuntu-latest-mapping-bwa-mem2-1
166 KB
logs-test-ubuntu-latest-mapping-bwa-mem2-2
191 KB
logs-test-ubuntu-latest-mappings-table
20.6 KB
logs-test-ubuntu-latest-pileup-1
63.1 KB
logs-test-ubuntu-latest-trimming-adapterremoval-1
63.9 KB
logs-test-ubuntu-latest-trimming-adapterremoval-2
173 KB
logs-test-ubuntu-latest-trimming-adapterremoval-3
74.7 KB
logs-test-ubuntu-latest-trimming-cutadapt-1
71.1 KB
logs-test-ubuntu-latest-trimming-cutadapt-2
271 KB
logs-test-ubuntu-latest-trimming-fastp-1
80.2 KB
logs-test-ubuntu-latest-trimming-fastp-2
72.1 KB
logs-test-ubuntu-latest-trimming-fastp-3
75 KB
logs-test-ubuntu-latest-trimming-none
20.7 KB
logs-test-ubuntu-latest-trimming-seqprep-1
60.6 KB
logs-test-ubuntu-latest-trimming-seqprep-2
59.7 KB
logs-test-ubuntu-latest-trimming-skewer-1
91.3 KB
logs-test-ubuntu-latest-trimming-skewer-2
91.4 KB