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693649c
Add Benjamin.
clpetix May 27, 2025
98b7d6b
Update citations
clpetix May 27, 2025
901b2fb
Small tweek to Benjamin's biography.
clpetix May 27, 2025
5a292b6
Merge branch 'feature/2025-spring-student-update' of https://github.c…
clpetix May 27, 2025
4fccbce
Add Dylan to members.
clpetix May 28, 2025
f90f4d4
Fix Dylan's role.
clpetix May 28, 2025
51f2144
Add Hollie Arnsdorff.
clpetix Jun 11, 2025
d1553b8
Update citations
clpetix Jun 11, 2025
cd540d9
Add lammpsio logo.
clpetix Jun 25, 2025
a8c6edd
Merge branch 'feature/2025-spring-student-update' of https://github.c…
clpetix Jun 25, 2025
87879a4
Add Kaeleb Barnett.
clpetix Jun 26, 2025
009ee41
Update Benjamin's bio.
clpetix Jul 23, 2025
4709132
Update citations
clpetix Jul 23, 2025
ac8c8a3
Add Benjamin's projects.
clpetix Jul 23, 2025
0b6500b
Merge branch 'feature/2025-spring-student-update' of https://github.c…
clpetix Jul 23, 2025
925550a
Fix small type in bus project.
clpetix Jul 23, 2025
15ed85c
Add research cards to research page.
clpetix Jul 23, 2025
c9a1e18
Add Jinny's project.
clpetix Aug 20, 2025
9de7c64
Update Kaeleb Barnett's role to alumni.
clpetix Aug 20, 2025
2745952
Update Clara De La Torre's role to alumni.
clpetix Aug 20, 2025
51d8031
Update MPCD project titile.
clpetix Aug 27, 2025
9697306
Add image to Jinny's project.
clpetix Aug 27, 2025
0d84294
Link photo for MPCD both spots.
clpetix Aug 27, 2025
ebdf722
Add research overview photo.
clpetix Aug 27, 2025
957d4f7
Make MPCD image 400x400.
clpetix Aug 27, 2025
0ea1bbb
Add Benjamin's projects.
clpetix Aug 28, 2025
584124c
Rearrange research projects
mphoward Aug 29, 2025
be9a75c
Update members
mphoward Aug 29, 2025
9b66482
Edit some text
mphoward Aug 29, 2025
a228693
Reorganize software
mphoward Aug 29, 2025
ad6cc5e
Revert changed cache file
mphoward Aug 29, 2025
1de2e34
Move up alumni
mphoward Aug 29, 2025
75caafc
Add label for current group
mphoward Aug 29, 2025
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58 changes: 42 additions & 16 deletions _data/citations.yaml
Original file line number Diff line number Diff line change
@@ -1,5 +1,47 @@
# DO NOT EDIT, GENERATED AUTOMATICALLY

- id: doi:10.1021/acs.jpcb.5c01451
title: Approximation of Anisotropic Pair Potentials Using Multivariate Interpolation
authors:
- Mohammadreza Fakhraei
- Chris A. Kieslich
- Michael P. Howard
publisher: The Journal of Physical Chemistry B
date: '2025-06-27'
link: https://doi.org/g9tpzc
orcid: 0000-0002-9561-4165
plugin: orcid.py
file: orcid.yaml
- id: doi:10.1063/5.0260883
title: Exploring the role of hydrodynamic interactions in spherically confined drying
colloidal suspensions
authors:
- Mayukh Kundu
- Kritika Kritika
- Yashraj M. Wani
- Arash Nikoubashman
- Michael P. Howard
publisher: The Journal of Chemical Physics
date: '2025-04-18'
link: https://doi.org/g9mf2h
orcid: 0000-0002-9561-4165
plugin: orcid.py
file: orcid.yaml
- id: doi:10.1039/D4SM01301H
title: Effects of ligand <i>vs.</i> linker on phase behavior and mechanical properties
of nanoparticle gels
authors:
- Qizan Chen
- Dinesh Sundaravadivelu Devarajan
- Arash Nikoubashman
- Michael P. Howard
- Jeetain Mittal
publisher: Soft Matter
date: '2025-01-01'
link: https://doi.org/g9mf2j
orcid: 0000-0002-9561-4165
plugin: orcid.py
file: orcid.yaml
- id: doi:10.1021/acs.jpcb.4c05674
title: Dynamics of Nanoparticles in Solutions of Semiflexible Ring Polymers
authors:
Expand Down Expand Up @@ -175,22 +217,6 @@
orcid: 0000-0002-9561-4165
plugin: orcid.py
file: orcid.yaml
- id: doi:10.1101/2022.07.04.498718
title: Effect of Charge Distribution on the Dynamics of Polyampholytic Disordered
Proteins
authors:
- Dinesh Sundaravadivelu Devarajan
- Shiv Rekhi
- Arash Nikoubashman
- Young C. Kim
- Michael P. Howard
- Jeetain Mittal
publisher: Cold Spring Harbor Laboratory
date: '2022-07-04'
link: https://doi.org/gr2vcm
orcid: 0000-0002-9561-4165
plugin: orcid.py
file: orcid.yaml
- id: doi:10.1063/5.0075002
title: Diffusion and sedimentation in colloidal suspensions using multiparticle
collision dynamics with a discrete particle model
Expand Down
33 changes: 30 additions & 3 deletions _data/research.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -7,11 +7,11 @@
repo:
tags:

- title: Multiscale inverse design of nanocrystal superlattices
- title: Simulation of hydrodynamic interactions in soft materials
subtitle:
group: featured
image: images/inverse_design_figure.png
link: research#multiscale-inverse-design-of-nanocrystal-superlattices
image: images/research-mpcd.jpg
link: research#simulation-of-hydrodynamic-interactions-in-soft-materials
description:
repo:
tags:
Expand All @@ -33,3 +33,30 @@
description:
repo:
tags:

- title: Molecular simulations of multicomponent transport in polymer membranes
subtitle:
group: featured
image: images/research-multicomp-diff.jpg
link: research#molecular-simulations-of-multicomponent-transport-in-polymer-membranes
description:
repo:
tags:

- title: Multiscale inverse design of nanocrystal superlattices
subtitle:
group: featured
image: images/inverse_design_figure.png
link: research#multiscale-inverse-design-of-nanocrystal-superlattices
description:
repo:
tags:

- title: Materials optimization for advanced bus technologies
subtitle:
group: featured
image: images/research-transportation.jpg
link: research#materials-optimization-for-advanced-bus-technologies
description:
repo:
tags:
40 changes: 24 additions & 16 deletions _data/software.yaml
Original file line number Diff line number Diff line change
@@ -1,28 +1,37 @@
- title: relentless
subtitle: <a href="https://relentless.readthedocs.io/en/latest/">[docs]</a>
subtitle:
group: featured
image: images/relentless_icon.png
link: https://github.com/mphowardlab/relentless
link: https://relentless.readthedocs.io
description: relentless is an easy-to-use, highly extensible Python package for integrating molecular simulations with optimization for computational materials design.
repo:
repo:
tags:

- title: flyft
- title: lammpsio
subtitle:
group: featured
image: images/lammpsio_icon.png
link: https://lammpsio.readthedocs.io
description: lammpsio is a set of Python tools for working with LAMMPS data and dump files.
repo:
tags:

- title: hoomd.mpcd
subtitle:
group: featured
image: images/software.png
link: https://github.com/mphowardlab/flyft
description: flyft is a classical density functional theory solver.
repo:
link: https://hoomd-blue.readthedocs.io/en/stable/hoomd/module-mpcd.html
description: Multiparticle collision dynamics in HOOMD-blue.
repo:
tags:

- title: azplugins
subtitle: <a href="https://azplugins.readthedocs.io">[docs]</a>
subtitle:
group: featured
image: images/software.png
link: https://github.com/mphowardlab/azplugins
link: https://azplugins.readthedocs.io
description: azplugins is a component (plugin) for HOOMD-blue which expands its functionality for tackling a variety of problems in soft matter physics.
repo:
repo:
tags:

- title: gsd-vmd
Expand All @@ -31,15 +40,14 @@
image: images/software.png
link: https://github.com/mphowardlab/gsd-vmd
description: gsd-vmd provides a VMD molfile plugin reader for GSD files generated by HOOMD-blue.
repo:
repo:
tags:

- title: lammpsio
- title: flyft
subtitle:
group: featured
image: images/software.png
link: https://github.com/mphowardlab/lammpsio
description: lammpsio is a set of pure Python tools for working with LAMMPS data and dump files.
repo:
link: https://github.com/mphowardlab/flyft
description: flyft is a classical density functional theory solver.
repo:
tags:

12 changes: 12 additions & 0 deletions _members/arnsdorff-hollie.md
Original file line number Diff line number Diff line change
@@ -0,0 +1,12 @@
---
name: Hollie Arnsdorff
image: images/arnsdorff-hollie.jpg
role: phd-student
links:
email: [email protected]
education:
- The University of Mississippi, B.S. in Chemical Engineering
---

Hollie joined the lab in 2025 and is co-advised by Dr. Cassandra Porter. Her
research experimentally and computationally studies brush active-layer membranes.
9 changes: 9 additions & 0 deletions _members/barnett-kaeleb.md
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@@ -0,0 +1,9 @@
---
name: Kaeleb Barnett
image: images/barnett-kaeleb.jpg
role: undergrad-alum
---

Kaeleb worked in the lab during Summer 2025 as an undergraduate researcher with
Levi. His project aimed to simulate the dynamics of binary mixtures of rods and
spheres.
6 changes: 3 additions & 3 deletions _members/bush-michaela.md
Original file line number Diff line number Diff line change
Expand Up @@ -8,6 +8,6 @@ education:
- Auburn University, B.S. in Chemical Engineering
---

Michaela joined the lab in 2021 and is co-advised by Dr. Chris Kieslich.
Michaela's research is developing surrogate modeling strategies, based on the
Smolyak sparse grid approach, for optimization of complex black-box functions.
Michaela joined the lab in 2021. She is developing our open-source multiparticle
colision dynamics software in HOOMD-blue to more efficiently simulate
nanoparticle suspensions.
4 changes: 2 additions & 2 deletions _members/cha-jinny.md
Original file line number Diff line number Diff line change
@@ -1,13 +1,13 @@
---
name: Jinny Cha
image: images/cha-jinny.jpg
role: phd-student
role: phd-candidate
links:
email: [email protected]
education:
- Auburn University, B.S. in Chemical Engineering
---

Jinny joined the lab in 2023. She is developing our open-source multiparticle
coliision dynamics software in HOOMD-blue to include complex confining
colision dynamics software in HOOMD-blue to include complex confining
boundaries.
8 changes: 4 additions & 4 deletions _members/cravey-luke.md
Original file line number Diff line number Diff line change
Expand Up @@ -2,10 +2,10 @@
name: Luke Cravey
image: images/cravey-luke.jpg
role: undergrad-alum
links:
email: [email protected]
education:
- Auburn University, B.S. in Chemical Engineering (2025)
---

Luke worked in the lab an undergraduate researcher in Summer 2024 (with Mayukh)
Luke worked in the lab an undergraduate researcher in Summer 2024 with Mayukh
through the CASE REU. He modeled the thermodynamics and self-assembly of patchy
colloids. Luke plans to pursue a Ph.D. in chemical engineering upon graduation.
colloids.
12 changes: 5 additions & 7 deletions _members/delatorre-clara.md
Original file line number Diff line number Diff line change
@@ -1,14 +1,12 @@
---
name: Clara De La Torre
image: images/delatorre-clara.jpg
role: ms-student
links:
email: [email protected]
role: ms-alum
education:
- Texas A&M University, B.S. in Chemical Engineering
- Auburn University, M.S. in Chemical Engineering (2025)
---

Clara joined the lab in 2023.
Clara's research is understanding the effects of polymer architecture
and hydrophobic association on elastic turbulence in enhanced oil
recovery.
Clara worked in the lab from 2023 to 2025. Her research focused on understanding
the effects of polymer architecture and hydrophobic association on elastic
turbulence in enhanced oil recovery.
14 changes: 14 additions & 0 deletions _members/forson-benjamin.md
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@@ -0,0 +1,14 @@
---
name: Benjamin Forson
image: images/forson-benjamin.jpg
role: phd-student
links:
email: [email protected]
education:
- Kwame Nkrumah University of Science and Technology, B.Sc. Chemical Engineering
---

Benjamin joined the lab in 2024. His research uses computer modeling to
understand, and eventually optimize, the energy efficiency of materials for
advanced bus technologies. Additionally, he is using molecular simulations to
study transport properties of multicomponent systems through polymer membranes.
2 changes: 1 addition & 1 deletion _members/frison-noah.md
Original file line number Diff line number Diff line change
Expand Up @@ -6,6 +6,6 @@ education:
- Auburn University, B.S. in Chemical Engineering (2024)
---

Noah worked in the lab from 2022-2024 to investigate the transport
Noah worked in the lab from 2022 to 2024 to investigate the transport
properties of alcohol and water mixtures, with a particular focus on diffusion
coefficients and viscosity.
2 changes: 1 addition & 1 deletion _members/hall-brennan.md
Original file line number Diff line number Diff line change
Expand Up @@ -6,6 +6,6 @@ education:
- Auburn University, B.S. in Chemical Engineering (2024)
---

Brennan worked in the lab from 2022-2024 to investigate the transport
Brennan worked in the lab from 2022 to 2024 to investigate the transport
properties of alcohol and water mixtures, with a particular focus on diffusion
coefficients and viscosity.
10 changes: 6 additions & 4 deletions _members/howard-michael.md
Original file line number Diff line number Diff line change
Expand Up @@ -15,7 +15,9 @@ education:
Michael P. Howard is an Assistant Professor of Chemical Engineering at Auburn
University. He received his B.S. in Chemical Engineering from Penn State
University and his Ph.D. in Chemical Engineering from Princeton University. His
research uses computer simulations and statistical mechanics to understand and
design soft materials—including nanoparticles, polymers, and composites—with a
focus on nonequilibrium problems where thermodynamic and transport effects
compete to determine a material’s structure and properties.
research aims to use modeling and computer simulations to shorten the time and
reduce the cost of designing soft materials. A key focus is on modeling
self-assembling materials under realistic processing and use conditions, which
are difficult to describe because they are often far from equilibrium. He
received an ACS PRF Doctoral New Investigator grant in 2023 and NSF CAREER
award in 2025.
11 changes: 11 additions & 0 deletions _members/mcelheny-dylan.md
Original file line number Diff line number Diff line change
@@ -0,0 +1,11 @@
---
name: Dylan McElheny
image: images/mcelheny-dylan.jpg
role: undergrad-student
links:
email: [email protected]
---

Dylan joined the lab in 2025 as an undergraduate researcher working with
Mohammadreza to use surrogate modeling to approximate pairwise interactions of
proteins.
4 changes: 2 additions & 2 deletions _members/petix-levi.md
Original file line number Diff line number Diff line change
Expand Up @@ -9,5 +9,5 @@ education:
- The University of Mississippi, B.S. in Chemical Engineering
---

Levi joined the lab in 2021. His research develops strategies for
robust multi-scale inverse design of nanocrystal superlattices.
Levi joined the lab in 2021. His research develops strategies for robust
multi-scale inverse design of nanocrystal superlattices.
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18 changes: 8 additions & 10 deletions index.md
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Expand Up @@ -5,9 +5,8 @@

{% capture text %}

We use multiscale modeling, computer simulations, and fundamental chemical
engineering concepts to develop new scientific understanding and solutions
to engineering challenges in soft materials.
We use multiscale modeling and computer simulations to shorten the time and
reduce the cost of designing soft materials

{%
include button.html
Expand All @@ -22,17 +21,17 @@ to engineering challenges in soft materials.

{%
include feature.html
image="images/photo.jpg"
image="images/research-overview.jpg"
link="research"
title="Our Research"
text=text
%}

{% capture text %}

We are an active group of graduate and undergraduate researchers working together
to make an impact. We strive to become technically outstanding engineers and to
develop the future workforce in computational material sciences.
We are an active group of graduate and undergraduate researchers. We strive to
become technically outstanding engineers and to develop the future workforce of
computational scientists.

{%
include button.html
Expand All @@ -57,9 +56,8 @@ develop the future workforce in computational material sciences.

{% capture text %}

We develop new scientific software to enable our own work and to support other
researchers in our community. We aim to create more open, accessible, and
reproducible science.
We develop new software to enable our own work and to support other researchers
in our community. We aim to create more open and reproducible science.

{%
include button.html
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