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mtisza1 Follow

Overview Repositories 11 Projects 0 Packages 0 Stars 39

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mtisza1

Mike Tisza mtisza1

Assistant professor at Baylor College of Medicine. Formerly, Johns Hopkins/NIH. > Virus Discovery, Microbial Genomics, DNA Methylation

46 followers · 3 following

Baylor College of Medicine
Houston, TX, USA
https://tiszalab.github.io/

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Overview Repositories 11 Projects 0 Packages 0 Stars 39

Overview
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All Sources Forks Archived Can be sponsored Mirrors Templates

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All Python SCSS HTML Shell

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Last updated Name Stars

influenza_a_serotype Public template

assign sequencing reads to influenza A serotypes

Python 3 2 MIT License Updated Feb 6, 2025
tisza-genomics-lab Public

SCSS Updated Dec 18, 2024
teddy_vir_bac_marker_gene Public

Scripts for reproducing TEDDY virome/bacteriome analyses and figures

HTML 1 MIT License Updated Nov 4, 2024
Cenote-Taker3 Public

Discover and annotate the virome

Python 39 1 MIT License Updated Oct 12, 2024
bioconda-recipes Public
Forked from bioconda/bioconda-recipes

Conda recipes for the bioconda channel.

Shell MIT License Updated Oct 11, 2024
DNA_methylase_finder Public

Find Prokaryotic DNA methylase genes in proteins, contigs, or genomes

methylation gene-annotation epigenome methylases methyltransferases dna-methlyase dna-methyltransferase

Shell 10 MIT License Updated Jun 13, 2024
Cenote_Unlimited_Breadsticks Public

DEPRECATED: Discover divergent virus sequences, prune flanking cellular sequences, make basic report

virus discovery prediction hidden-markov-model phage contigs virus-discovery

Shell 6 MIT License Updated Jan 19, 2024
Cenote-Taker2 Public

Cenote-Taker2: Discover and Annotate Divergent Viral Contigs (Please use Cenote-Taker 3 instead)

virus annotation discovery genbank hhblits hhsearch metagenomes

Shell 55 7 MIT License Updated Jan 19, 2024
Cenote-Taker Public

DEPRECATED: Use Cenote-Taker 3 instead

virus genome taxonomy metagenomics genbank circle genome-annotation

Shell 14 2 MIT License Updated Jan 19, 2024
metscale Public
Forked from signaturescience/metscale

MetScale: snakemake workflows to scale metagenome analyses

Python BSD 3-Clause "New" or "Revised" License Updated Oct 12, 2022
VAPiD Public
Forked from rcs333/VAPiD

VAPiD: Viral Annotation and Identification Pipeline

Shell 1 MIT License Updated Aug 5, 2019

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Mike Tisza mtisza1

Achievements

Achievements

Highlights

influenza_a_serotype Public template

tisza-genomics-lab Public

teddy_vir_bac_marker_gene Public

Cenote-Taker3 Public

bioconda-recipes Public

DNA_methylase_finder Public

Cenote_Unlimited_Breadsticks Public

Cenote-Taker2 Public

Cenote-Taker Public

metscale Public

VAPiD Public