Fixed pre-commit

nf-core · Jan 20, 2025 · 5d8518e · 5d8518e
1 parent b1eb9ed
commit 5d8518e
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/conf/modules.config b/conf/modules.config
@@ -47,7 +47,7 @@ process {
         tag        = { "${meta.id}_run${meta.run}" }
     }
 
-  withName: TRIMMOMATIC {
+    withName: TRIMMOMATIC {
         ext.args   = "LEADING:30 TRAILING:30 SLIDINGWINDOW:4:20 MINLEN:35"
         publishDir = [
             [

diff --git a/subworkflows/local/shortread_preprocessing.nf b/subworkflows/local/shortread_preprocessing.nf
@@ -65,7 +65,7 @@ workflow SHORTREAD_PREPROCESSING {
             ch_multiqc_files = ch_multiqc_files.mix(ADAPTERREMOVAL_PE.out.settings)
             ch_multiqc_files = ch_multiqc_files.mix(ADAPTERREMOVAL_SE.out.settings)
         }
-     else if (params.clip_tool == 'trimmomatic') {
+        else if (params.clip_tool == 'trimmomatic') {
 
             TRIMMOMATIC(ch_raw_short_reads)