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  1. g2f-maize-quantitative-genetics g2f-maize-quantitative-genetics Public

    This repository demonstrates complementary approaches to quantitative genetics using the Genomes to Fields maize dataset: genetic discovery through GWAS and phenotype prediction through machine lea…

    R

  2. merscope-spatial-analysis merscope-spatial-analysis Public

    Analysis pipeline for targeted spatial transcriptomics data generated with the Vizgen MERSCOPE platform. Developed for tomato (Solanum lycopersicum) root tissue sections.

    Jupyter Notebook

  3. explant-counter explant-counter Public

    Automated counting of tomato cotyledon explants on MS plates using computer vision (OpenCV).

    Jupyter Notebook