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lines changed Original file line number Diff line number Diff line change @@ -348,6 +348,10 @@ def init_syn_preprocessing_wf(
348348 auto_bold_nss = False ,
349349 t1w_inversion = False ,
350350 sd_prior = True ,
351+ n4_iterations = (50 ,) * 5 ,
352+ n4_shrink_factor = 4 ,
353+ calculate_n4_spline_grid = False ,
354+ ** kwargs ,
351355):
352356 """
353357 Prepare EPI references and co-registration to anatomical for SyN.
@@ -470,6 +474,9 @@ def init_syn_preprocessing_wf(
470474 epi_reference_wf = init_epi_reference_wf (
471475 omp_nthreads = omp_nthreads ,
472476 auto_bold_nss = auto_bold_nss ,
477+ n4_iterations = n4_iterations ,
478+ n4_shrink_factor = n4_shrink_factor ,
479+ calculate_bspline_grid = calculate_n4_spline_grid ,
473480 )
474481 epi_brain = pe .Node (BrainExtraction (), name = 'epi_brain' )
475482 merge_output = pe .Node (
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