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Scripts used for template construction and pre-processing in the Sleep-Food-BMI study

Basic Notes:

  1. Scripts that start with "TT" were used for creating the template, otherwise the script is for processing the study data.
  2. Scripts are numbered (e.g. *_1.sh, *_2.sh) to indicate their respective step in the pipeline.
  3. Supercomputer scripts are written for either a qsub or slurm environment, and are wrapped with submit_sbatch scripts.

About

Scripts used for the paper: Jensen, C. D., Duraccio, K. M., Barnett, K. A., Carbine, K. A., Stevens, K. S., Muncy, N. M., & Kirwan, C. B. (2019). Sleep Duration Differentially Affects Brain Activation in Response to Food Images in Adolescents with Overweight/Obesity Compared to Adolescents with Normal Weight. Sleep. https://doi.org/10.1093/sleep/z…

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