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Create unit test on the full muscle model that reproduces Figure 1A from Liu, Hollopeter, & Jorgensen 2009

No due date 16% complete

This milestone is complete when:

  • Define parameters for simulated experiment using jNeuroML on the command line, based on the methods that went into the figure
  • Digitize the figure
  • Write a script that takes the digitized figure and the simulation output and calculates the error/difference
  • Write a script that generates an overlaid image of the simulated…

This milestone is complete when:

  • Define parameters for simulated experiment using jNeuroML on the command line, based on the methods that went into the figure
  • Digitize the figure
  • Write a script that takes the digitized figure and the simulation output and calculates the error/difference
  • Write a script that generates an overlaid image of the simulated and digitized data
  • Turn the error-generating script into a SciUnit test
  • Integrate the test in the test suite being run on TravisCI
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