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    • Fusion framework for management of functional imaging datasets
      Jupyter Notebook
      21401Updated May 28, 2026May 28, 2026
    • Python
      MIT License
      7900Updated May 28, 2026May 28, 2026
    • robotcode

      Public
      C
      0300Updated May 28, 2026May 28, 2026
    • SUITPy

      Public
      Jupyter Notebook
      Other
      93000Updated May 27, 2026May 27, 2026
    • Cerebellar Probabilistic Parcellation project using generativeMRF and FunctionalFusion
      Jupyter Notebook
      1200Updated May 26, 2026May 26, 2026
    • Jupyter Notebook
      MIT License
      3500Updated May 20, 2026May 20, 2026
    • Cortico cerebellar connectivity models from the Diedrichsenlab
      Jupyter Notebook
      MIT License
      1100Updated May 20, 2026May 20, 2026
    • nitools

      Public
      Basic Neuroimaging functions - stuff missing from nibabel and nilearn
      Python
      MIT License
      21401Updated May 8, 2026May 8, 2026
    • PcmPy

      Public
      PCM toolbox - implementation in Python
      Jupyter Notebook
      Other
      11600Updated May 8, 2026May 8, 2026
    • Pontine7T

      Public
      Codes for data analysis of Pontine project
      Jupyter Notebook
      1000Updated May 1, 2026May 1, 2026
    • Python
      MIT License
      0100Updated Apr 8, 2026Apr 8, 2026
    • Jupyter Notebook
      MIT License
      0040Updated Mar 25, 2026Mar 25, 2026
    • SCSS
      0010Updated Feb 24, 2026Feb 24, 2026
    • Python
      175420Updated Oct 26, 2025Oct 26, 2025
    • DCBC

      Public
      Python
      MIT License
      51231Updated Oct 24, 2025Oct 24, 2025
    • spmdefs

      Public
      Call-able API for SPM12 deformations - extracted from job-manager code for convenience
      MATLAB
      MIT License
      0000Updated Sep 22, 2025Sep 22, 2025
    • A set of didactic Jupyter notebook explaining the concept of variance partitioning in linear models
      Jupyter Notebook
      MIT License
      1200Updated Sep 10, 2025Sep 10, 2025
    • Code and Sources for the Diedrichsenlab blog
      TeX
      2501Updated Sep 10, 2025Sep 10, 2025
    • Jupyter Notebook
      MIT License
      0000Updated Jun 24, 2025Jun 24, 2025
    • Jupyter Notebook
      MIT License
      1000Updated May 9, 2025May 9, 2025
    • Tools to run SPM12 jobs
      MATLAB
      MIT License
      1100Updated Apr 4, 2025Apr 4, 2025
    • dataframe

      Public
      An implementation of Dataframes that should have been part of Matlab from the beginning
      MATLAB
      GNU General Public License v2.0
      0000Updated Nov 13, 2024Nov 13, 2024
    • region

      Public
      Toolbox for ROI analyses for fMRI data
      MATLAB
      0000Updated Sep 26, 2024Sep 26, 2024
    • Analysis functions for surface-based analyses, using freesurfer and connectome workbench
      MATLAB
      51610Updated Apr 19, 2024Apr 19, 2024
    • A pure JavaScript medical research image viewer.
      JavaScript
      Other
      208110Updated Jan 31, 2024Jan 31, 2024
    • Jupyter Notebook
      GNU General Public License v3.0
      4500Updated Dec 26, 2023Dec 26, 2023
    • Modelling of Sequence production and learning
      Jupyter Notebook
      1400Updated Nov 29, 2023Nov 29, 2023
    • fs_LR_32

      Public
      Standard human cortical surface-based template for neuroimaging analyses (Freesurfer, left-right-symmetric, ~32k vertices) v
      Ruby
      65510Updated Sep 26, 2023Sep 26, 2023
    • includes cases I used to analyze MDTB dataset
      MATLAB
      0001Updated Jun 22, 2022Jun 22, 2022
    • Analysis of resting state data for the SMARTS project
      MATLAB
      1100Updated Nov 26, 2021Nov 26, 2021
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