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    7 repositories

    • PRONTO

      Public
      rePort geneRator fOr iNpred Tumor bOards
      Python
      •
      GNU General Public License v3.0
      •4•0•16•3•Updated Mar 6, 2025Mar 6, 2025

    • TSOPPI_SADET

      Public
      Extraction of data for selected samples from either LocalApp or TSOPPI output directories
      Python
      •
      GNU Affero General Public License v3.0
      •1•0•12•0•Updated Mar 6, 2025Mar 6, 2025

    • 24-03_bioinfo_ws

      Public
      presentation and resources for NorPreM bioinformatics workshop in March 2024
      13•1•0•0•Updated Jan 27, 2025Jan 27, 2025

    • TSOPPI_documentation

      Public
      Documentation for the TSOPPI images/tools.
      GNU General Public License v3.0
      •0•0•1•0•Updated Dec 9, 2024Dec 9, 2024

    • local_app_prepper

      Public
      creates inputs.json files to be used with the LocalApp
      Python
      •
      GNU Affero General Public License v3.0
      •0•0•0•0•Updated Aug 28, 2024Aug 28, 2024

    • samplesheet_generator

      Public
      generates samplesheet compatible with the LocalApp
      Python
      •
      MIT License
      •1•0•4•0•Updated Mar 6, 2024Mar 6, 2024

    • tso500_nxf_workflow

      Public
      Nextflow workflow to run Illumina LocalApp and TSOPPI on TSO500 data
      Groovy
      •
      MIT License
      •1•0•2•0•Updated Dec 8, 2023Dec 8, 2023