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    25 repositories

    • python-neo

      Public
      Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •249•333•118•28•Updated Jan 18, 2025Jan 18, 2025

    • libNeuroML

      Public
      This package provides Python libNeuroML, for working with neuronal models specified in NeuroML
      pythonneuromlneuronal-models
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •33•39•11•5•Updated Jan 14, 2025Jan 14, 2025

    • elephant

      Public
      Elephant is the Electrophysiology Analysis Toolkit
      pythonstatisticsneurosciencedata-analysiselectrophysiologyhacktoberfestneurophysiology
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •92•205•16•14•Updated Jan 14, 2025Jan 14, 2025

    • neuroConstruct

      Public
      neuroConstruct: biophysically detailed neuronal modelling in 3D
      Python
      •
      GNU General Public License v2.0
      •24•48•33•2•Updated Dec 19, 2024Dec 19, 2024

    • neo-viewer

      Public
      Django/Angular/React software for graphing neural activity data (analog signals, spike trains etc.) read from Neo files.
      Python
      •
      MIT License
      •11•11•15•2•Updated Dec 18, 2024Dec 18, 2024

    • ephyviewer

      Public
      Simple viewers for ephys signals, events, video and more
      Python
      •
      MIT License
      •14•56•13•3•Updated Nov 18, 2024Nov 18, 2024

    • pypl2

      Public
      Python
      •2•0•0•1•Updated Oct 29, 2024Oct 29, 2024

    • neurotune

      Public
      Package for fitting/optimization of NeuroML models
      computational-neuroscienceevolutionary-algorithmmodel-fittingneuromlpython
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •11•16•1•1•Updated Oct 24, 2024Oct 24, 2024

    • pyelectro

      Public
      Analysis of electrophysiology in Python
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •3•6•2•1•Updated Oct 23, 2024Oct 23, 2024

    • lazyarray

      Public
      lazyarray is a Python package that provides a lazily-evaluated numerical array class, larray, based on and compatible with NumPy arrays.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •10•21•3•0•Updated Sep 5, 2024Sep 5, 2024

    • cobrawap

      Public
      Collaborative Brain Wave Analysis Pipeline (Cobrawap)
      Python
      •
      GNU General Public License v3.0
      •16•19•11•9•Updated Sep 3, 2024Sep 3, 2024

    • neuralensemble-docker

      Public
      Docker images for neuroscience
      Dockerfile
      •
      MIT License
      •7•13•3•1•Updated Aug 20, 2024Aug 20, 2024

    • PyNN

      Public
      A Python package for simulator-independent specification of neuronal network models.
      Python
      •
      Other
      •127•282•117•16•Updated Jul 25, 2024Jul 25, 2024

    • neuralensemble.github.io

      Public
      Source for the neuralensemble.org website
      HTML
      •0•0•0•0•Updated Apr 17, 2024Apr 17, 2024

    • MotionClouds

      Public
      Synthesizing moving textures with parameterized features
      motion-detectionperceptiontexture-synthesisstimulusmotion-cloudstimulimotion-perceptionrandom-textures
      Python
      •5•11•1•0•Updated Sep 26, 2022Sep 26, 2022

    • Networks_SIG

      Public
      INCF SIG on Standardised Representations of Network Structures
      HTML
      •5•7•8•0•Updated Sep 13, 2022Sep 13, 2022

    • spack

      Public
      A flexible package manager that supports multiple versions, configurations, platforms, and compilers.
      Python
      •
      Other
      •2.3k•0•0•0•Updated Apr 28, 2022Apr 28, 2022

    • python-quantities

      Public
      Quantities package for the python programming language
      Python
      •75•0•0•1•Updated Aug 23, 2021Aug 23, 2021

    • motionclouds_website

      Public
      Website for "Model-based stimulus synthesis of natural-like random textures for the study of motion perception"
      neurosciencecomputational-neurosciencevisionnatural-images
      Jupyter Notebook
      •2•4•0•0•Updated Feb 24, 2021Feb 24, 2021

    • SimulationDataFormats

      Public
      C
      •4•2•0•0•Updated Feb 24, 2021Feb 24, 2021

    • pype9

      Public
      Python pipelines to simulate and manipulate neuronal models, and networks thereof, described in NineML (http://nineml.net)
      Python
      •
      MIT License
      •7•3•31•0•Updated Apr 12, 2020Apr 12, 2020

    • parameters

      Public
      Management of large, hierarchical parameter sets for modelling and simulation
      Python
      •
      GNU General Public License v2.0
      •11•5•5•0•Updated Mar 30, 2020Mar 30, 2020

    • NeuroTools

      Public
      NeuroTools is a collection of tools for representing and anlyzing neuroscientific data.
      Python
      •
      GNU General Public License v2.0
      •10•31•0•0•Updated Mar 20, 2020Mar 20, 2020

    • NeuroinformaticsTutorial

      Public
      A tutorial on neuroinformatics resources for computational modellers
      Python
      •19•64•4•1•Updated Sep 17, 2019Sep 17, 2019

    • nipy-artwork

      Public
      Fliers, images, etc
      Other
      •15•0•0•0•Updated Jan 21, 2013Jan 21, 2013