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    • oneiric

      Public
      Spatial Simulation package
      R
      1000Updated Jan 2, 2026Jan 2, 2026
    • Vesalius

      Public
      Vesalius: Dissecting Tissue Anatomy from Spatial Transcriptomic Data
      R
      92010Updated Jan 1, 2026Jan 1, 2026
    • Vesalius Mapping Analysis
      R
      0100Updated Aug 27, 2025Aug 27, 2025
    • GRNPT

      Public
      Python
      2000Updated Jun 28, 2025Jun 28, 2025
    • CellNeighborEX

      Public
      Python
      0000Updated Apr 21, 2025Apr 21, 2025
    • SC2Spa

      Public
      SC2Spa: Predict the spatial coordinates of single cells based on a spatial transcriptomic reference
      Python
      2000Updated Mar 19, 2025Mar 19, 2025
    • A tool for decomposing doublet (mixed two single cells when sequencing) to two single cells based on their trascriptome.
      Jupyter Notebook
      1000Updated Oct 14, 2024Oct 14, 2024
    • acg_2024

      Public
      HTML
      17000Updated Mar 19, 2024Mar 19, 2024