Skip to content

@micom-dev micom-dev

All

    Repositories list

    5 repositories

    • micom

      Public
      Python package to study microbial communities using metabolic modeling.
      pythonfluxcommunity
      pythonfluxcommunitymodelingsystems-biologybiochemistrymicrobiomehacktoberfestcobramicrobiota
      Python
      •
      Apache License 2.0
      •24•139•14•2•Updated Oct 7, 2026Oct 7, 2026

    • q2-micom

      Public
      A Qiime plugin for MICOM.
      hacktoberfestmetabolic-modelsqiime2
      hacktoberfestmetabolic-modelsqiime216s-seq
      Python
      •
      Apache License 2.0
      •5•10•1•0•Updated Sep 22, 2026Sep 22, 2026

    • databases

      Public
      Workflows and input data for the construction of the standard MICOM model databases.
      Nextflow
      •
      Apache License 2.0
      •3•2•3•0•Updated Nov 13, 2025Nov 13, 2025

    • media

      Public
      Environmental growth media for MICOM.
      hacktoberfestmetabolic-modelsmicom
      hacktoberfestmetabolic-modelsmicom
      Jupyter Notebook
      •
      Apache License 2.0
      •5•6•4•0•Updated Nov 7, 2022Nov 7, 2022

    • paper

      Public
      Materials and Code for the micom manuscript.
      Python
      •
      Apache License 2.0
      •3•3•1•0•Updated Mar 15, 2021Mar 15, 2021
    ProTip! When viewing an organization's repositories, you can use the props. filter to filter by custom property.