Repositories list

• DESeq2-shiny

  Public
  A shiny application to perform differential gene expression analysis of count data using DESeq2. The app also allows unsupervised exploration of data using PCA and hierarchical clustering.

  R

  •

  MIT License

  •3•0•0•0•Updated Aug 17, 2023Aug 17, 2023

• bac_dev

  Public
  A Guide for Running BAC_DEV Container on a Cluster

  Shell

  •0•0•0•0•Updated Jun 27, 2023Jun 27, 2023

• nf-qimme2

  Public
  Open version of BAC QIIME2 Nextflow workflow

  Nextflow

  •0•1•0•0•Updated Feb 24, 2022Feb 24, 2022

• FastQC

  Public
  A quality control analysis tool for high throughput sequencing data

  Java

  •

  Other

  •88•0•0•0•Updated Aug 7, 2020Aug 7, 2020

• cutadapt

  Public
  Cutadapt removes adapter sequences from sequencing reads

  Python

  •

  MIT License

  •134•0•0•0•Updated Nov 7, 2019Nov 7, 2019