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E_{SHE}$ → E^0_{abs}
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pierre-24 committed Jun 7, 2024
1 parent fa3d243 commit 66963c2
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3 changes: 2 additions & 1 deletion TODO.md
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Expand Up @@ -3,7 +3,7 @@
- [ ] **12**!!
- [ ] 62 → 61
- [ ] Use $E^f$ in Fig. 15 (and check discussion, especially **4**)
- [ ] Fig. 16 $E_SHE$ → $E^0_abs$
- [x] Fig. 16 $E_{SHE}$ → $E^0_abs$
- [ ] Conclude & abstract & keywords
- [x] Aknowledgements
- [x] Clean up the bibliography, check for duplicates
Expand All @@ -12,3 +12,4 @@
- [ ] prepare a TOC
- [ ] Research highlight
- [ ] mark missing values in Tables
- [ ] tries to move points as much as possible in graphs
4 changes: 2 additions & 2 deletions analyses/plot_pot_matsui.py
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Expand Up @@ -95,7 +95,7 @@ def plot_corr(ax, data: pandas.DataFrame, solvent: str):

subdata_wa, param_matsui_wa = prepare_data(data, data_exp, 'water')

ax1.text(.72, .95, '$E_{{SHE}}$ = {:.2f} V, $f$ = {:.3f}, $\\mu$ = {:.5f} a$_0^{{-1}}$'.format(*param_matsui_wa))
ax1.text(.72, .95, '$E_{{abs}}^0(\\text{{SHE}})$ = {:.2f} V, $f$ = {:.3f}, $\\mu$ = {:.5f} a$_0^{{-1}}$'.format(*param_matsui_wa))

plot_exp_vs_matsui(ax1, subdata_wa, 'water', 'Family.P6O', 'tab:blue')
plot_exp_vs_matsui(ax1, subdata_wa, 'water', 'Family.P5O', 'black')
Expand All @@ -117,7 +117,7 @@ def plot_corr(ax, data: pandas.DataFrame, solvent: str):

subdata_ac, param_matsui_ac = prepare_data(data, data_exp, 'acetonitrile')

ax2.text(.8, 1.18, '$E_{{SHE}}$ = {:.2f} V, $f$ = {:.3f}, $\\mu$ = {:.5f} a$_0^{{-1}}$'.format(*param_matsui_ac))
ax2.text(.8, 1.18, '$E_{{abs}}^0(\\text{{SHE}})$ = {:.2f} V, $f$ = {:.3f}, $\\mu$ = {:.5f} a$_0^{{-1}}$'.format(*param_matsui_ac))

plot_exp_vs_matsui(ax2, subdata_ac, 'acetonitrile', 'Family.P6O', 'tab:blue')
plot_exp_vs_matsui(ax2, subdata_ac, 'acetonitrile', 'Family.P5O', 'black')
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2 changes: 1 addition & 1 deletion nitroxides.tex
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Expand Up @@ -541,7 +541,7 @@ \subsection{Comparison to experiment} \label{sec:exp}
\begin{figure}[!h]
\centering
\includegraphics[width=.8\linewidth]{Figure16}
\caption{Comparison between experimental ($E^0_{rel} $ vs SHE, from Table S11) and corrected oxidation potential using the scheme of Matsui et al. \cite{matsuiDensityFunctionalTheory2013} [Eq.~\eqref{eq:matsui}, with the parameter $E_{SHE}$, $f$, and $\mu$ obtained by a least-square procedure], as computed at the $\omega$B97X-D/6-311+G(d) level in water (left) and acetonitrile (right). The dashed line is a linear regression, obtained without the DH correction. }
\caption{Comparison between experimental ($E^0_{rel} $ vs SHE, from Table S11) and corrected oxidation potential using the scheme of Matsui et al. \cite{matsuiDensityFunctionalTheory2013} [Eq.~\eqref{eq:matsui}, with the parameters $E_{abs}^0(\text{SHE})$, $f$, and $\mu$ obtained by a least-square procedure], as computed at the $\omega$B97X-D/6-311+G(d) level in water (left) and acetonitrile (right). The dashed line is a linear regression, obtained without the DH correction. }
\label{fig:matsui}
\end{figure}

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