Performance optimization - #34

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mzueva merged 8 commits into

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mzueva/performance-optimization

Mar 6, 2026

Commits on Mar 6, 2026

Switch target and query in mmseqs inputs (query should be the smaller assay dataset). Introduce "fast mode" that reduces time for sequence matching. Propagate cpu/memory settings from UI.
mzueva
committed
c98d8b5
Additional mmseqs argument for optimization
mzueva
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3d17371
Detect format from file content for csv/tsv
mzueva
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b901f12
Missing dot
mzueva
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c0be70f
Xlsx support for assay data
mzueva
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9663fba
Update changeset
mzueva
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e5a4186
Update mmseqs version
mzueva
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0a4442f
Reduce memory requests
mzueva
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6695ed7