Switch to retentive outputs

[mzueva]

No description provided.

[gemini-code-assist]

Summary of Changes

Hello @mzueva, I'm Gemini Code Assist¹! I'm currently reviewing this pull request and will post my feedback shortly. In the meantime, here's a summary to help you and other reviewers quickly get up to speed!

This pull request updates the output handling mechanism within the application's core model. By switching to 'retentive outputs', the system is now configured to persist or retain the state of specific data outputs more effectively, ensuring their availability across different operations or contexts. This modification enhances the robustness of data flow within the model.

Highlights

• Output Mechanism Update: The outputWithStatus method has been replaced with retentiveOutputWithStatus for both 'pt' and 'pf' outputs within the BlockModel definition in model/src/index.ts. This change likely affects how these specific outputs manage and retain their state.
• Changelog Entry: A new changeset file, .changeset/witty-ravens-smile.md, has been added to document this change, indicating a patch release for @platforma-open/milaboratories.repertoire-diversity-2.model.

Changelog

• .changeset/witty-ravens-smile.md
  • Added a new changeset file to document the switch to retentive outputs.
• model/src/index.ts
  • Replaced outputWithStatus with retentiveOutputWithStatus for 'pt' and 'pf' outputs.

Activity

• No human activity (comments, reviews, or approvals) has been recorded on this pull request yet.

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[gemini-code-assist]

Code Review

This pull request switches two outputs, pt and pf, to be retentive. While the change itself is simple, my review found that both of these outputs have significant pre-existing bugs. The pf output has a circular dependency on itself which will cause a stack overflow. The pt output depends on pf and also appears to use incorrect arguments for createPlDataTableV2. I've added comments with high and critical severity to address these issues, which should be fixed to ensure the block functions correctly.