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1. phylociraptor phylociraptor Public

   rapid phylogenomic tree calculator - A highly customizable framework for reproducible phylogenomic inference

   Python 25 6

2. annocomba annocomba Public

   Automated genome annotation pipeline combining MAKER and funannotate with singularity and snakemake

   Perl 6 3

3. dockerfiles dockerfiles Public

   A collection of Dockerfiles for different containers I use.

   Python 2 1

4. iqtreeGUI iqtreeGUI Public

   iqtreeGUI - A graphical user interface for IQ-TREE

   Python 4 5

5. funannotate-docker funannotate-docker Public

   Docker container for the funannotate genome annotation pipeline

   Roff 6 4

6. reproducibility-workshop reproducibility-workshop Public

   Materials for the course "Reproducibility in Bioinformatics"

   Shell 6 2