add support for zlib and mesh inputs

js/src/niimathOperators.json

@@ -24,6 +24,19 @@
     "args": [],
     "help": "reslice to 1mm size in coronal slice direction with 256^3 voxels"
   },
+  "comply": {
+    "args": [
+      "nx",
+      "ny",
+      "nz",
+      "dx",
+      "dy",
+      "dz",
+      "f_high",
+      "isLinear"
+    ],
+    "help": "conform to axial slice with dx*dy*dzmm size and dx*dy*dz voxels. f_high bright clamping (0.98 for top 2%). Linear (1) or nearest-neighbor (0)"
+  },
   "crop": {
     "args": [
       "tmin",

src/Makefile

@@ -61,7 +61,7 @@ sanitize:
 	$(CNAME) -O1 -g -Wno-deprecated -fsanitize=address -fno-omit-frame-pointer $(MFLAGS) $(UFLAGS) $(ZFLAGS) -o niimath
 
 wasm:
-	emcc -O3 $(MFLAGS) $(UFLAGS) -s DEMANGLE_SUPPORT=1 -s EXPORTED_RUNTIME_METHODS='["callMain", "ccall", "cwrap", "FS_createDataFile", "FS_readFile", "FS_unlink", "allocateUTF8", "getValue", "stringToUTF8", "setValue"]' -s ALLOW_MEMORY_GROWTH=1 -s WASM=1 -s EXPORT_ES6=1 -s MODULARIZE=1 -s EXPORTED_FUNCTIONS='["_main", "_malloc", "_free"]' -s INVOKE_RUN=0 -o ../js/src/niimath.js
+	emcc -O3 $(MFLAGS) $(UFLAGS) $(ZFLAGS) -s USE_ZLIB=1 -s DEMANGLE_SUPPORT=1 -s EXPORTED_RUNTIME_METHODS='["callMain", "ccall", "cwrap", "FS_createDataFile", "FS_readFile", "FS_unlink", "allocateUTF8", "getValue", "stringToUTF8", "setValue"]' -s ALLOW_MEMORY_GROWTH=1 -s WASM=1 -s EXPORT_ES6=1 -s MODULARIZE=1 -s EXPORTED_FUNCTIONS='["_main", "_malloc", "_free"]' -s INVOKE_RUN=0 -o ../js/src/niimath.js
 	# hint: consider further optimizations:
 	#   wasm-opt -O3 -o output.wasm niimath.wasm; rm niimath.wasm; mv output.wasm niimath.wasm