serialintervalr

R package for serial interval models with isolation-aware observation bias.

Included Stan model

• inst/stan/scenario3a_gamma.stan
• inst/stan/likelihoods_gamma.stan (included by the main model)

Example

library(serialintervalr)
mod <- scenario3a_gamma_model()
# fit <- fit_scenario3a_gamma(data = stan_data, chains = 4)