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sanger-tol · Feb 10, 2025 · 2b2c7a5 · 2b2c7a5
1 parent b2c0c7d
commit 2b2c7a5
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/conf/base.config b/conf/base.config
@@ -26,7 +26,7 @@ process {
     withName: "MINIMAP2_ALIGN_SE" {
         cpus            = { check_max( 16                  ) }
         memory          = { check_max( 1.GB     * ( reference.size() < 2e9 ? 60 : Math.ceil( ( reference.size() / 1e+9 ) * 20 ) * task.attempt )) }
-        time            = { check_max( 1.h      * ( reference.size() < 1e9 ? 15 : reference.size() < 10e9 ? 30 : 48)) }
+        time            = { check_max( 22.h     * task.attempt, 'time'    ) }
     }
 
     // Process-specific resource requirements

diff --git a/conf/test.config b/conf/test.config
@@ -26,6 +26,6 @@ params {
 
     // Input data for full size test
     // Limit resources so that this can run on GitHub Actions
-    input       =  "${baseDir}/assets/test.yaml"
+    input       = "${baseDir}/assets/test.yaml"
     steps       = "btk,cpretext,merquryfk"
 }